PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
42151-42200 / 86044 show all
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.5382
0.0000
0.0000
509241000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
1.4493
0.0000
0.0000
168000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.7375
11100
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
2.7027
0.0000
0.0000
272000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
5.4054
0.0000
0.0000
235000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.2324
0.0000
0.0000
31288000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9130
10100
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7179
10100
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.5435
0.0000
0.0000
448051000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.6006
0.0000
0.0000
416786000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.5384
0.0000
0.0000
448129000
ghariani-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.5382
0.0000
0.0000
509241000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.6680
0.0000
0.0000
466840000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0491000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.9732
0.0000
0.0000
4407000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5358
0.0000
0.0000
81485000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.1538
0.0000
0.0000
1649000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.4329
0.0000
0.0000
2460000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
049000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
013000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELD1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
ghariani-varprowlINDELD1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
047000
ghariani-varprowlINDELD1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
048000
ghariani-varprowlINDELD1_5map_l100_m2_e1hetalt
0.0000
1.9608
0.0000
0.0000
150000
ghariani-varprowlINDELD1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlINDELD1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
013000
ghariani-varprowlINDELD1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlINDELD1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlINDELD1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELD1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
07000
ghariani-varprowlINDELD1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
07000