PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
40951-41000 / 86044 show all | |||||||||||||||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m1_e0 | homalt | 60.0000 | 100.0000 | 3 | 2 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e0 | * | 42.8571 | 27.2727 | 100.0000 | 99.7487 | 6 | 16 | 1 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e0 | het | 35.2941 | 21.4286 | 100.0000 | 99.5902 | 3 | 11 | 1 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e0 | homalt | 50.0000 | 100.0000 | 3 | 3 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e1 | * | 42.8571 | 27.2727 | 100.0000 | 99.7537 | 6 | 16 | 1 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e1 | het | 35.2941 | 21.4286 | 100.0000 | 99.6016 | 3 | 11 | 1 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | map_l250_m2_e1 | homalt | 50.0000 | 100.0000 | 3 | 3 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | map_siren | hetalt | 21.6216 | 12.1212 | 100.0000 | 96.0265 | 12 | 87 | 12 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | segdup | homalt | 71.7949 | 56.0000 | 100.0000 | 93.8416 | 28 | 22 | 21 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapplat | INDEL | D6_15 | tech_badpromoters | het | 18.1818 | 10.0000 | 100.0000 | 88.8889 | 1 | 9 | 1 | 0 | 0 | ||
| gduggal-snapplat | INDEL | D6_15 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | * | * | 0.0000 | 0.0157 | 0.0000 | 0.0000 | 1 | 6376 | 0 | 0 | 0 | ||
| gduggal-snapplat | INDEL | I16_PLUS | * | het | 0.0000 | 0.0000 | 0.0000 | 0 | 2718 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | * | hetalt | 0.0000 | 0.0477 | 0.0000 | 0.0000 | 1 | 2097 | 0 | 0 | 0 | ||
| gduggal-snapplat | INDEL | I16_PLUS | * | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1561 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | HG002complexvar | * | 0.0000 | 0.0000 | 0.0000 | 0 | 1309 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | HG002complexvar | het | 0.0000 | 0.0000 | 0.0000 | 0 | 665 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | HG002complexvar | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 335 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | HG002complexvar | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 309 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | HG002compoundhet | * | 0.0000 | 0.0467 | 0.0000 | 0.0000 | 1 | 2142 | 0 | 0 | 0 | ||
| gduggal-snapplat | INDEL | I16_PLUS | HG002compoundhet | het | 0.0000 | 0.0000 | 0.0000 | 0 | 47 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | HG002compoundhet | hetalt | 0.0000 | 0.0478 | 0.0000 | 0.0000 | 1 | 2092 | 0 | 0 | 0 | ||
| gduggal-snapplat | INDEL | I16_PLUS | HG002compoundhet | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 3 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | decoy | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | decoy | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | decoy | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | decoy | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | func_cds | * | 0.0000 | 0.0000 | 0.0000 | 0 | 12 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | func_cds | het | 0.0000 | 0.0000 | 0.0000 | 0 | 9 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | func_cds | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | func_cds | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 206 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 95 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 86 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_51to200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 25 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_lt51bp_gt95identity_merged | * | 0.0000 | 0.0000 | 0.0000 | 0 | 1141 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_lt51bp_gt95identity_merged | het | 0.0000 | 0.0000 | 0.0000 | 0 | 436 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 583 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_AllRepeats_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 122 | 0 | 0 | 0 | |||
| gduggal-snapplat | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 1530 | 0 | 0 | 0 | |||