PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
4001-4050 / 86044 show all
ltrigg-rtg2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
ltrigg-rtg2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.0000
81.8182
100.0000
87.8378
92900
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
96.8750
22300
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.0588
10200
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.2973
94.7368
100.0000
79.3478
1811900
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.8985
99.7972
100.0000
50.7028
492149100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8145
99.6296
100.0000
55.7214
269126700
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
67.5000
1201300
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
40.2266
211021100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
97.9006
95.8874
100.0000
43.1730
4431943700
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
96.4981
93.2331
100.0000
49.1758
3722737000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
98.2456
96.5517
100.0000
71.8750
8438100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
99.0291
98.0769
100.0000
72.5275
5115000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
67.6471
1201100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
95.4545
91.3043
100.0000
72.2222
2122000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
84.2105
72.7273
100.0000
96.0610
32123100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
84.6154
73.3333
100.0000
94.6602
1141100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
99.0354
98.0892
100.0000
53.5604
154315000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
99.1736
98.3607
100.0000
67.0588
6015600
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
99.0099
98.0392
100.0000
32.0000
5015100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
98.8764
97.7778
100.0000
44.8718
4414300
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
93.6170
88.0000
100.0000
26.6667
2232200
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
96.0000
92.3077
100.0000
29.4118
1211200
ltrigg-rtg2INDELD16_PLUSmap_l100_m0_e0hetalt
85.7143
75.0000
100.0000
86.3636
31300
ltrigg-rtg2INDELD16_PLUSmap_l100_m0_e0homalt
88.8889
80.0000
100.0000
90.0000
41400
ltrigg-rtg2INDELD16_PLUSmap_l100_m1_e0hetalt
81.8182
69.2308
100.0000
72.5806
1881700
ltrigg-rtg2INDELD16_PLUSmap_l100_m1_e0homalt
84.6154
73.3333
100.0000
85.8824
1141200
ltrigg-rtg2INDELD16_PLUSmap_l100_m2_e0hetalt
81.8182
69.2308
100.0000
72.5806
1881700
ltrigg-rtg2INDELD16_PLUSmap_l100_m2_e0homalt
81.4815
68.7500
100.0000
86.9565
1151200
ltrigg-rtg2INDELD16_PLUSmap_l100_m2_e1hetalt
82.3529
70.0000
100.0000
69.6970
2192000
ltrigg-rtg2INDELD16_PLUSmap_l100_m2_e1homalt
81.4815
68.7500
100.0000
87.2340
1151200
ltrigg-rtg2INDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
92.8571
10100
ltrigg-rtg2INDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
91.3043
20200
ltrigg-rtg2INDELD16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
91.3043
21200
ltrigg-rtg2INDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
90.4762
40400
ltrigg-rtg2INDELD16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
91.6667
21200
ltrigg-rtg2INDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
91.1111
40400
ltrigg-rtg2INDELD16_PLUSmap_l125_m2_e1hetalt
66.6667
50.0000
100.0000
92.0000
22200
ltrigg-rtg2INDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
91.1111
40400
ltrigg-rtg2INDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
93.7500
10100
ltrigg-rtg2INDELD16_PLUSmap_l150_m1_e0homalt
0.0000
100.0000
00000