PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
3651-3700 / 86044 show all
ndellapenna-hhgaINDELC6_15map_siren*
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15map_sirenhet
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15map_sirenhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15map_sirenhomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segdup*
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segduphet
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segduphetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segduphomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segdupwithalt*
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segdupwithalthet
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segdupwithalthetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15segdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSdecoy*
90.9091
83.3333
100.0000
98.6877
51500
ndellapenna-hhgaINDELD16_PLUSdecoyhet
85.7143
75.0000
100.0000
98.9209
31300
ndellapenna-hhgaINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
97.7273
20200
ndellapenna-hhgaINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
57.1429
1201200
ndellapenna-hhgaINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
60.0000
80800
ndellapenna-hhgaINDELD16_PLUSfunc_cdshetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
42.8571
40400
ndellapenna-hhgaINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
ndellapenna-hhgaINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
93.3530
87.5346
100.0000
58.9909
3164531700
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
66.6667
50.0000
100.0000
53.8462
66600
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.0431
98.1043
100.0000
47.8589
207420700
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
73.6842
58.3333
100.0000
50.0000
75900
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
97.7778
95.6522
100.0000
79.0476
2212200
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
80.0000
66.6667
100.0000
89.2857
63600
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
78.0488
64.0000
100.0000
50.0000
1691300
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000