PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
34051-34100 / 86044 show all
ckim-isaacINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9964
10100
ckim-isaacINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9949
10100
ckim-isaacINDEL*segdupwithalthetalt
0.0000
100.0000
00000
ckim-isaacINDEL*segdupwithalthomalt
0.0000
100.0000
00000
ckim-isaacINDEL*tech_badpromoters*
92.9577
86.8421
100.0000
48.4127
66106500
ckim-isaacINDEL*tech_badpromotershet
94.5946
89.7436
100.0000
48.4375
3543300
ckim-isaacINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
28.5714
40500
ckim-isaacINDEL*tech_badpromotershomalt
90.0000
81.8182
100.0000
50.9091
2762700
ckim-isaacINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000