PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
31101-31150 / 86044 show all
jlack-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
jlack-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
jlack-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
56.5789
3303300
jlack-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000