PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
26101-26150 / 86044 show all
egarrison-hhgaINDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.3451
40300
egarrison-hhgaINDELI16_PLUSsegduphomalt
97.2973
94.7368
100.0000
90.6736
1811800
egarrison-hhgaINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
69.2308
40400
egarrison-hhgaINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
66.6667
20200
egarrison-hhgaINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
egarrison-hhgaINDELI1_5decoy*
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5decoyhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5decoyhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5decoyhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
egarrison-hhgaINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
29.1667
119011900
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9336
10100
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3871
10100
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9319
10100
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2456
10100
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
68.0000
51.5152
100.0000
41.2979
18717619900
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
52.8000
35.8696
100.0000
62.5000
33593300
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
55.5556
100.0000
54000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
50.4505
33.7349
100.0000
36.5385
28553300
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
02000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
02000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
60.8295
43.7086
100.0000
34.7826
66857500
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
70.0000
53.8462
100.0000
53.3333
76700
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
10000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
66.6667
50.0000
100.0000
12.5000
66700
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELI6_15map_l100_m0_e0*
53.3333
36.3636
100.0000
94.2857
12211200
ckim-isaacINDELI6_15map_l100_m0_e0het
58.3333
41.1765
100.0000
96.3636
710600