PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
25801-25850 / 86044 show all
egarrison-hhgaINDELC6_15map_l250_m2_e0homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15map_l250_m2_e1*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15map_l250_m2_e1het
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15map_siren*
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15map_sirenhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15segdup*
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15segduphet
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15segduphetalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15segduphomalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15segdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15segdupwithalthet
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15segdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15segdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSdecoy*
90.9091
83.3333
100.0000
98.5836
51500
egarrison-hhgaINDELD16_PLUSdecoyhet
85.7143
75.0000
100.0000
98.7805
31300
egarrison-hhgaINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
97.8261
20200
egarrison-hhgaINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
57.1429
1201200
egarrison-hhgaINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
60.0000
80800
egarrison-hhgaINDELD16_PLUSfunc_cdshetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
42.8571
40400
egarrison-hhgaINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
egarrison-hhgaINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
94.7522
90.0277
100.0000
59.1990
3253632600
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
58.8235
41.6667
100.0000
57.1429
57600
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.2840
98.5782
100.0000
47.3418
208320800
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
80.0000
66.6667
100.0000
43.7500
84900
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
95.4545
91.3043
100.0000
78.1250
2122100
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
94.1176
88.8889
100.0000
85.1852
81800
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
61.0169
43.9024
100.0000
54.0925
14418412900
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000