PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
2151-2200 / 86044 show all
rpoplin-dv42INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
rpoplin-dv42INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
97.5610
11100
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
84.2105
72.7273
100.0000
78.5714
83900
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.5251
97.0930
100.0000
78.1127
167516700
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
97.5610
11100
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
91.4286
84.2105
100.0000
62.7451
1631900
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
90.9091
83.3333
100.0000
40.0000
1021200
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
82.3056
69.9317
100.0000
33.4008
30713232900
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
46.1538
1201400
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.3419
2302300
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
87.5000
77.7778
100.0000
89.0625
72700
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
92.8571
86.6667
100.0000
96.9412
1321300
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
98.9011
97.8261
100.0000
66.2162
225522500
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
98.0000
96.0784
100.0000
20.6349
4925000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
98.8764
97.7778
100.0000
60.3604
4414400
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
86.3636
76.0000
100.0000
28.5714
1962000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l100_m0_e0het
88.2353
78.9474
100.0000
93.3921
1541500
rpoplin-dv42INDELD16_PLUSmap_l100_m0_e0hetalt
85.7143
75.0000
100.0000
82.3529
31300
rpoplin-dv42INDELD16_PLUSmap_l100_m1_e0hetalt
79.0698
65.3846
100.0000
66.0000
1791700
rpoplin-dv42INDELD16_PLUSmap_l100_m2_e0hetalt
79.0698
65.3846
100.0000
67.3077
1791700
rpoplin-dv42INDELD16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
64.2857
20102000
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0*
100.0000
100.0000
100.0000
93.7824
1201200
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0het
100.0000
100.0000
100.0000
92.8000
90900
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
92.8571
10100
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
96.2963
20200
rpoplin-dv42INDELD16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
84.2105
30300
rpoplin-dv42INDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
95.9596
40400
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
85.7143
30300
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
96.2264
40400
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e1hetalt
85.7143
75.0000
100.0000
85.7143
31300
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
96.2264
40400
rpoplin-dv42INDELD16_PLUSmap_l150_m0_e0*
100.0000
100.0000
100.0000
95.0000
70700
rpoplin-dv42INDELD16_PLUSmap_l150_m0_e0het
100.0000
100.0000
100.0000
91.9540
70700
rpoplin-dv42INDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l150_m1_e0*
96.5517
93.3333
100.0000
94.2623
1411400
rpoplin-dv42INDELD16_PLUSmap_l150_m1_e0het
96.2963
92.8571
100.0000
91.8750
1311300