PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
21751-21800 / 86044 show all
gduggal-bwaplatINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
gduggal-bwaplatINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI16_PLUStech_badpromoters*
40.0000
25.0000
100.0000
87.5000
13100
gduggal-bwaplatINDELI16_PLUStech_badpromotershet
0.0000
100.0000
02000
gduggal-bwaplatINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI16_PLUStech_badpromotershomalt
66.6667
50.0000
100.0000
80.0000
11100
gduggal-bwaplatINDELI1_5decoy*
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5decoyhet
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5decoyhetalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5decoyhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5func_cds*
95.0437
90.5556
100.0000
45.8472
1631716300
gduggal-bwaplatINDELI1_5func_cdshet
90.7407
83.0508
100.0000
62.8788
49104900
gduggal-bwaplatINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwaplatINDELI1_5func_cdshomalt
96.9697
94.1176
100.0000
31.2883
112711200
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9532
10100
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7342
10100
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9514
10100
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.6301
10100
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
78.3715
64.4351
100.0000
82.8396
30817030700
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
78.7879
65.0000
100.0000
89.2265
39213900
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
76.8683
62.4277
100.0000
85.5414
21613021500
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
42.9825
27.3743
100.0000
60.1626
491304900
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
01000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
78.0488
64.0000
100.0000
72.8814
1691600
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
02000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
82.0513
69.5652
100.0000
20.0000
1671600
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELI1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELI1_5map_l100_m0_e0hetalt
61.5385
44.4444
100.0000
98.6301
45400