PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
16951-17000 / 86044 show all
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.3043
20200
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.8571
10100
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.6764
99.3548
100.0000
84.7525
154115400
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0388
7407400
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
94.1176
88.8889
100.0000
99.3191
81800
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.8087
60600
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.7425
99.4863
100.0000
18.9415
581358200
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.3545
94.8454
100.0000
23.3333
9259200
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
asubramanian-gatkINDELD6_15map_l100_m0_e0hetalt
94.4444
89.4737
100.0000
83.6364
1721800
asubramanian-gatkINDELD6_15map_l100_m0_e0homalt
93.3333
87.5000
100.0000
91.1765
2132100
asubramanian-gatkINDELD6_15map_l100_m1_e0homalt
94.2149
89.0625
100.0000
87.5546
5775700
asubramanian-gatkINDELD6_15map_l100_m2_e0homalt
94.3089
89.2308
100.0000
87.9418
5875800
asubramanian-gatkINDELD6_15map_l100_m2_e1homalt
94.4882
89.5522
100.0000
87.8543
6076000
asubramanian-gatkINDELD6_15map_l125_m0_e0*
94.3820
89.3617
100.0000
94.9766
4254300
asubramanian-gatkINDELD6_15map_l125_m0_e0het
96.4286
93.1034
100.0000
95.6240
2722700
asubramanian-gatkINDELD6_15map_l125_m0_e0hetalt
90.9091
83.3333
100.0000
90.9091
51600
asubramanian-gatkINDELD6_15map_l125_m0_e0homalt
90.9091
83.3333
100.0000
94.2197
1021000
asubramanian-gatkINDELD6_15map_l125_m1_e0hetalt
94.4444
89.4737
100.0000
86.1789
1721700
asubramanian-gatkINDELD6_15map_l125_m1_e0homalt
95.3846
91.1765
100.0000
89.9676
3133100
asubramanian-gatkINDELD6_15map_l125_m2_e0hetalt
94.4444
89.4737
100.0000
87.6812
1721700
asubramanian-gatkINDELD6_15map_l125_m2_e0homalt
94.1176
88.8889
100.0000
90.2736
3243200
asubramanian-gatkINDELD6_15map_l125_m2_e1hetalt
91.8919
85.0000
100.0000
88.1119
1731700
asubramanian-gatkINDELD6_15map_l125_m2_e1homalt
94.2857
89.1892
100.0000
90.2077
3343300
asubramanian-gatkINDELD6_15map_l150_m0_e0*
96.7742
93.7500
100.0000
95.5840
3023100
asubramanian-gatkINDELD6_15map_l150_m0_e0het
97.4359
95.0000
100.0000
96.2451
1911900
asubramanian-gatkINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
89.4737
50600
asubramanian-gatkINDELD6_15map_l150_m0_e0homalt
92.3077
85.7143
100.0000
95.6835
61600
asubramanian-gatkINDELD6_15map_l150_m1_e0hetalt
93.3333
87.5000
100.0000
91.2088
71800
asubramanian-gatkINDELD6_15map_l150_m1_e0homalt
93.8776
88.4615
100.0000
90.4167
2332300
asubramanian-gatkINDELD6_15map_l150_m2_e0hetalt
93.3333
87.5000
100.0000
92.1569
71800
asubramanian-gatkINDELD6_15map_l150_m2_e0homalt
92.3077
85.7143
100.0000
90.9434
2442400
asubramanian-gatkINDELD6_15map_l150_m2_e1hetalt
87.5000
77.7778
100.0000
92.4528
72800
asubramanian-gatkINDELD6_15map_l150_m2_e1homalt
92.5926
86.2069
100.0000
90.7063
2542500
asubramanian-gatkINDELD6_15map_l250_m0_e0*
90.9091
83.3333
100.0000
98.6264
51500
asubramanian-gatkINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
98.4436
40400
asubramanian-gatkINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15map_l250_m0_e0homalt
66.6667
50.0000
100.0000
98.7179
11100
asubramanian-gatkINDELD6_15map_l250_m1_e0*
90.9091
83.3333
100.0000
97.6366
1531600
asubramanian-gatkINDELD6_15map_l250_m1_e0het
95.2381
90.9091
100.0000
97.9592
1011000
asubramanian-gatkINDELD6_15map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
96.2264
11200
asubramanian-gatkINDELD6_15map_l250_m1_e0homalt
88.8889
80.0000
100.0000
97.0149
41400