PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 328 329 330 331 332 333 334 335 336 ... 1720 1721 » 16551-16600 / 86044 show all
astatham-gatk	INDEL	*	segdupwithalt	het	100.0000	100.0000	100.0000	99.9960	1	0	1	0	0
astatham-gatk	INDEL	*	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	*	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	55.0898	75	1	75	0	0
astatham-gatk	INDEL	*	tech_badpromoters	het	98.7013	97.4359	100.0000	53.6585	38	1	38	0	0
astatham-gatk	INDEL	*	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	4	0	4	0	0
astatham-gatk	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
astatham-gatk	INDEL	C16_PLUS	*	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	*	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	*	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	*	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	decoy	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	decoy	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	decoy	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	func_cds	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	func_cds	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	func_cds	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge