PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
16451-16500 / 86044 show all
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
33.3333
0.0000
0.0000
510000
anovak-vgSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
93.4066
60600
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvmap_l100_m0_e0hetalt
0.0000
37.5000
0.0000
0.0000
610000
anovak-vgSNPtvmap_l100_m1_e0hetalt
0.0000
29.2683
0.0000
0.0000
1229000
anovak-vgSNPtvmap_l100_m2_e0hetalt
0.0000
30.9524
0.0000
0.0000
1329000
anovak-vgSNPtvmap_l100_m2_e1hetalt
0.0000
30.2326
0.0000
0.0000
1330000
anovak-vgSNPtvmap_l125_m0_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgSNPtvmap_l125_m1_e0hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNPtvmap_l125_m2_e0hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNPtvmap_l125_m2_e1hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNPtvmap_l150_m0_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNPtvmap_l150_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNPtvmap_l150_m2_e0hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNPtvmap_l150_m2_e1hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNPtvmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvmap_l250_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgSNPtvmap_l250_m2_e0hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtvmap_l250_m2_e1hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtvmap_sirenhetalt
0.0000
25.9259
0.0000
0.0000
2160000
anovak-vgSNPtvsegduphetalt
0.0000
14.2857
0.0000
0.0000
16000