PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
16401-16450 / 86044 show all
anovak-vgSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtimap_l100_m0_e0hetalt
0.0000
35.7143
0.0000
0.0000
59000
anovak-vgSNPtimap_l100_m1_e0hetalt
0.0000
34.4828
0.0000
0.0000
1019000
anovak-vgSNPtimap_l100_m2_e0hetalt
0.0000
36.6667
0.0000
0.0000
1119000
anovak-vgSNPtimap_l100_m2_e1hetalt
0.0000
35.4839
0.0000
0.0000
1120000
anovak-vgSNPtimap_l125_m0_e0hetalt
0.0000
37.5000
0.0000
0.0000
35000
anovak-vgSNPtimap_l125_m1_e0hetalt
0.0000
33.3333
0.0000
0.0000
816000
anovak-vgSNPtimap_l125_m2_e0hetalt
0.0000
33.3333
0.0000
0.0000
816000
anovak-vgSNPtimap_l125_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
816000
anovak-vgSNPtimap_l150_m0_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNPtimap_l150_m1_e0hetalt
0.0000
26.6667
0.0000
0.0000
411000
anovak-vgSNPtimap_l150_m2_e0hetalt
0.0000
26.6667
0.0000
0.0000
411000
anovak-vgSNPtimap_l150_m2_e1hetalt
0.0000
26.6667
0.0000
0.0000
411000
anovak-vgSNPtimap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtimap_l250_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgSNPtimap_l250_m2_e0hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtimap_l250_m2_e1hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNPtimap_sirenhetalt
0.0000
29.8246
0.0000
0.0000
1740000
anovak-vgSNPtisegduphetalt
0.0000
0.0000
0.0000
02000
anovak-vgSNPtisegdupwithalt*
0.0000
100.0000
00000
anovak-vgSNPtisegdupwithalthet
0.0000
100.0000
00000
anovak-vgSNPtisegdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtisegdupwithalthomalt
0.0000
100.0000
00000
anovak-vgSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtv*hetalt
0.0000
14.4661
0.0000
0.0000
126745000
anovak-vgSNPtvHG002complexvarhetalt
0.0000
15.8065
0.0000
0.0000
49261000
anovak-vgSNPtvHG002compoundhethetalt
0.0000
14.6172
0.0000
0.0000
126736000
anovak-vgSNPtvdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvdecoyhomalt
0.0000
100.0000
00000
anovak-vgSNPtvfunc_cdshetalt
0.0000
30.0000
0.0000
0.0000
37000
anovak-vgSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
23.0769
0.0000
0.0000
310000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
33.3333
0.0000
0.0000
510000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000