PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
16151-16200 / 86044 show all
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
31.0550
0.0000
0.0000
18314065000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
35.7143
0.0000
0.0000
3054000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
42.8571
0.0000
0.0000
4864000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
45.0000
0.0000
0.0000
2733000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
16.2975
0.0000
0.0000
103529000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
30.1700
0.0000
0.0000
14023245000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
32.2661
0.0000
0.0000
13002729000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
30.3646
0.0000
0.0000
14493323000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
31.0550
0.0000
0.0000
18314065000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
33.0618
0.0000
0.0000
12582547000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
7.2626
0.0000
0.0000
13166000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
26.8987
0.0000
0.0000
85231000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
10000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
33.3333
0.0000
0.0000
377754000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
17.0507
0.0000
0.0000
37180000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
44.0895
0.0000
0.0000
138175000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
8.6957
0.0000
0.0000
221000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5map_l100_m0_e0hetalt
0.0000
55.5556
0.0000
0.0000
54000
anovak-vgINDELI1_5map_l100_m1_e0hetalt
0.0000
34.0909
0.0000
0.0000
1529000
anovak-vgINDELI1_5map_l100_m2_e0hetalt
0.0000
34.0909
0.0000
0.0000
1529000
anovak-vgINDELI1_5map_l100_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
1530000
anovak-vgINDELI1_5map_l125_m0_e0hetalt
0.0000
50.0000
0.0000
0.0000
22000
anovak-vgINDELI1_5map_l125_m1_e0hetalt
0.0000
41.1765
0.0000
0.0000
710000
anovak-vgINDELI1_5map_l125_m2_e0hetalt
0.0000
36.8421
0.0000
0.0000
712000
anovak-vgINDELI1_5map_l125_m2_e1hetalt
0.0000
36.8421
0.0000
0.0000
712000
anovak-vgINDELI1_5map_l150_m0_e0hetalt
0.0000
33.3333
0.0000
0.0000
12000
anovak-vgINDELI1_5map_l150_m1_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgINDELI1_5map_l150_m2_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgINDELI1_5map_l150_m2_e1hetalt
0.0000
40.0000
0.0000
0.0000
46000
anovak-vgINDELI1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5map_l250_m1_e0hetalt
0.0000
50.0000
0.0000
0.0000
11000