PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
16051-16100 / 86044 show all
bgallagher-sentieonINDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
bgallagher-sentieonINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9378
40400
bgallagher-sentieonINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9561
20200
bgallagher-sentieonINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6094
10100
bgallagher-sentieonINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9380
10100
bgallagher-sentieonINDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
bgallagher-sentieonINDELD1_5func_cdshet
100.0000
100.0000
100.0000
46.5839
8508600
bgallagher-sentieonINDELD1_5func_cdshetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8695
1101100
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7118
80800
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.2973
10100
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3651
20200
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.3386
84.0580
100.0000
55.3846
58115800
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9130
1001000
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7993
70700
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.8750
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3443
20200
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
81.9472
369036900
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.1481
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.3684
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9912
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.8452
13300133000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.4783
87.7551
100.0000
25.8621
4364300
bgallagher-sentieonINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.4576
30300
bgallagher-sentieonINDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
95.2569
1211200
bgallagher-sentieonINDELD1_5map_l125_m2_e0hetalt
96.5517
93.3333
100.0000
95.2055
1411400
bgallagher-sentieonINDELD1_5map_l125_m2_e1hetalt
96.5517
93.3333
100.0000
95.3177
1411400
bgallagher-sentieonINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.7011
20200
bgallagher-sentieonINDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.0297
61600
bgallagher-sentieonINDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.3799
61600
bgallagher-sentieonINDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.0213
71700
bgallagher-sentieonINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3085
1301300
bgallagher-sentieonINDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.1429
30300
bgallagher-sentieonINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
94.2387
5615600
bgallagher-sentieonINDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.6744
30300
bgallagher-sentieonINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
94.6895
5915900
bgallagher-sentieonINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.7444
30300