PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
15151-15200 / 86044 show all
astatham-gatkINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.9798
20200
astatham-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.3871
20200
astatham-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.4127
20200
astatham-gatkINDELI1_5map_sirenhetalt
98.6425
97.3214
100.0000
87.1765
109310900
astatham-gatkINDELI1_5segduphetalt
97.8723
95.8333
100.0000
96.0338
4624700
astatham-gatkINDELI1_5segdupwithalt*
0.0000
100.0000
00000
astatham-gatkINDELI1_5segdupwithalthet
0.0000
100.0000
00000
astatham-gatkINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
54.1667
2202200
astatham-gatkINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
astatham-gatkINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
astatham-gatkINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.0645
1301300
astatham-gatkINDELI6_15HG002complexvarhetalt
97.3132
94.7670
100.0000
56.0117
115964120000
astatham-gatkINDELI6_15decoy*
0.0000
100.0000
00000
astatham-gatkINDELI6_15decoyhet
0.0000
100.0000
00000
astatham-gatkINDELI6_15decoyhetalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15decoyhomalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
astatham-gatkINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
25.0000
31300
astatham-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.1132
96.2963
100.0000
78.9189
7837800
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.0901
81.9672
100.0000
54.1284
50115000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.4318
98.8701
100.0000
74.1124
175217500
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
99.4083
98.8235
100.0000
57.0707
8418500
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
69.3955
242024300
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
71.7593
122012200
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
58.9147
5205300
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
70.8155
6806800
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.0228
98.0645
100.0000
82.4138
152315300
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.1870
98.3871
100.0000
85.8124
6116200
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.6744
95.4545
100.0000
75.4386
4224200
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.2977
4904900
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8644
20200
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3921
20200
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000