PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
15001-15050 / 86044 show all
astatham-gatkINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.8254
20200
astatham-gatkINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.1290
60600
astatham-gatkINDELD6_15map_sirenhetalt
97.4093
94.9495
100.0000
75.7106
9459400
astatham-gatkINDELD6_15segduphetalt
94.6237
89.7959
100.0000
90.3720
4454400
astatham-gatkINDELD6_15segdupwithalt*
0.0000
100.0000
00000
astatham-gatkINDELD6_15segdupwithalthet
0.0000
100.0000
00000
astatham-gatkINDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
astatham-gatkINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
astatham-gatkINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
52.7778
1701700
astatham-gatkINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
54.5455
1001000
astatham-gatkINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
astatham-gatkINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
astatham-gatkINDELI16_PLUSHG002complexvarhet
99.2424
98.4962
100.0000
64.5705
6551063100
astatham-gatkINDELI16_PLUSdecoy*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
74.4186
1111100
astatham-gatkINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
65.3846
90900
astatham-gatkINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
astatham-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
86.6667
20200
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
95.7576
91.8605
100.0000
78.0303
7978700
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.9624
1802000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
92.1311
2402400
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.7183
99.4382
100.0000
81.2500
177117700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.5349
99.0741
100.0000
80.8044
107110500
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.2821
3503700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
85.4772
3503500
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.8152
8908900
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.4630
5305300
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
64.9123
2002000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.1579
1601600
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
96.1538
92.5926
100.0000
92.2481
2522000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
93.6937
88.1356
100.0000
73.7327
5275700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.1034
22200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
50.0000
100.0000
11000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
77.7778
11200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000