PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
14851-14900 / 86044 show all
astatham-gatkINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
98.4127
10100
astatham-gatkINDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
94.1176
10100
astatham-gatkINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
98.4127
10100
astatham-gatkINDELD16_PLUSmap_sirenhetalt
93.1034
87.0968
100.0000
82.7381
2742900
astatham-gatkINDELD16_PLUSsegduphetalt
87.5000
77.7778
100.0000
93.1298
72900
astatham-gatkINDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
96.8586
1201200
astatham-gatkINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
42.8571
40400
astatham-gatkINDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
astatham-gatkINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9387
40400
astatham-gatkINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9567
20200
astatham-gatkINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6377
10100
astatham-gatkINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9387
10100
astatham-gatkINDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
astatham-gatkINDELD1_5func_cdshet
100.0000
100.0000
100.0000
46.5839
8508600
astatham-gatkINDELD1_5func_cdshetalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8718
1101100
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7076
80800
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.2973
10100
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3730
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.3386
84.0580
100.0000
55.7252
58115800
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9166
1001000
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7952
70700
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.8750
10100
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
81.9648
369036900
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.1132
10100
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.3684
10100
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9920
10100
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.6667
13300133000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
96.8421
93.8776
100.0000
26.9841
4634600
astatham-gatkINDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
94.0000
1221200
astatham-gatkINDELD1_5map_l100_m1_e0hetalt
95.5556
91.4894
100.0000
90.5495
4344300
astatham-gatkINDELD1_5map_l100_m2_e0hetalt
95.6522
91.6667
100.0000
90.8163
4444500
astatham-gatkINDELD1_5map_l100_m2_e1hetalt
95.9184
92.1569
100.0000
90.4573
4744800