PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
14801-14850 / 86044 show all
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8442
10100
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
10100
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1111
20200
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
84.8837
1011300
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5338
40400
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8395
10100
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
10100
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1031
20200
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.2973
94.7368
100.0000
72.5000
1812200
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8145
99.6296
100.0000
63.2231
269126700
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.6522
91.6667
100.0000
45.8333
1111300
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
54.2857
1201600
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
93.0233
90900
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
97.6994
1501500
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
67.6259
4504500
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
95.8333
92.0000
100.0000
44.4444
2322500
astatham-gatkINDELD16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.5660
40500
astatham-gatkINDELD16_PLUSmap_l100_m1_e0hetalt
91.6667
84.6154
100.0000
78.7037
2242300
astatham-gatkINDELD16_PLUSmap_l100_m2_e0hetalt
91.6667
84.6154
100.0000
79.1304
2242400
astatham-gatkINDELD16_PLUSmap_l100_m2_e1hetalt
90.9091
83.3333
100.0000
78.2258
2552700
astatham-gatkINDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.5517
10100
astatham-gatkINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.7011
20200
astatham-gatkINDELD16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.1818
30300
astatham-gatkINDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.0583
40400
astatham-gatkINDELD16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
93.6170
30300
astatham-gatkINDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
98.4127
40400
astatham-gatkINDELD16_PLUSmap_l125_m2_e1hetalt
85.7143
75.0000
100.0000
93.6170
31300
astatham-gatkINDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
98.4615
40400
astatham-gatkINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.8750
10100
astatham-gatkINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
96.8750
10100
astatham-gatkINDELD16_PLUSmap_l150_m2_e0homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l150_m2_e1hetalt
66.6667
50.0000
100.0000
96.8750
11100
astatham-gatkINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
93.7500
10100
astatham-gatkINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
94.1176
10100