PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
14251-14300 / 86044 show all
anovak-vgINDELD16_PLUSmap_l250_m0_e0*
100.0000
100.0000
100.0000
98.3871
10100
anovak-vgINDELD16_PLUSmap_l250_m0_e0het
100.0000
100.0000
100.0000
97.8261
10100
anovak-vgINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
97.1429
10100
anovak-vgINDELD16_PLUSmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.2973
10100
anovak-vgINDELD16_PLUSmap_sirenhetalt
0.0000
6.4516
0.0000
0.0000
229000
anovak-vgINDELD16_PLUSsegduphetalt
0.0000
0.0000
0.0000
09000
anovak-vgINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELD16_PLUStech_badpromotershet
40.0000
25.0000
100.0000
0.0000
13100
anovak-vgINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5*hetalt
0.0000
29.0971
0.0000
0.0000
29817264000
anovak-vgINDELD1_5HG002complexvarhetalt
0.0000
35.5769
0.0000
0.0000
481871000
anovak-vgINDELD1_5HG002compoundhethetalt
0.0000
29.0525
0.0000
0.0000
29687248000
anovak-vgINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9735
20200
anovak-vgINDELD1_5decoyhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
16.7947
0.0000
0.0000
3061516000
anovak-vgINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
30.4432
0.0000
0.0000
28306466000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
28.3070
0.0000
0.0000
26306661000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
24.6377
0.0000
0.0000
1752000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
35.1351
0.0000
0.0000
2648000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
40.5405
0.0000
0.0000
1522000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
16.8087
0.0000
0.0000
2171074000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
10000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
10000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
27.6590
0.0000
0.0000
22395856000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
29.6470
0.0000
0.0000
20244803000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
27.7254
0.0000
0.0000
22665907000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
28.3070
0.0000
0.0000
26306661000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
29.5818
0.0000
0.0000
20374849000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
6.5173
0.0000
0.0000
32459000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
24.5742
0.0000
0.0000
101310000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
36.0348
0.0000
0.0000
538955000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
18.1538
0.0000
0.0000
118532000