PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
14201-14250 / 86044 show all
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
41.6667
0.0000
0.0000
57000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
11.3343
0.0000
0.0000
79618000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
100.0000
0.0000
00100
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
0.0000
00100
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
16.9450
0.0000
0.0000
2741343000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
20.6568
0.0000
0.0000
195749000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
16.7981
0.0000
0.0000
2771372000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
16.4164
0.0000
0.0000
3171614000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
19.7704
0.0000
0.0000
155629000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
9.1116
0.0000
0.0000
40399000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
8.3333
0.0000
0.0000
111000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
48.2759
31.8182
100.0000
91.5730
14301500
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
22.5610
0.0000
0.0000
74254000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
11.4286
0.0000
0.0000
40310000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
25.4902
0.0000
0.0000
1338000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
025000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
04000
anovak-vgINDELD16_PLUSmap_l100_m0_e0homalt
57.1429
40.0000
100.0000
96.6102
23200
anovak-vgINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
7.6923
0.0000
0.0000
224000
anovak-vgINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
7.6923
0.0000
0.0000
224000
anovak-vgINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
6.6667
0.0000
0.0000
228000
anovak-vgINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l125_m0_e0homalt
0.0000
100.0000
02000
anovak-vgINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
03000
anovak-vgINDELD16_PLUSmap_l125_m1_e0homalt
66.6667
50.0000
100.0000
97.1831
22200
anovak-vgINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
03000
anovak-vgINDELD16_PLUSmap_l125_m2_e0homalt
66.6667
50.0000
100.0000
97.3333
22200
anovak-vgINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
04000
anovak-vgINDELD16_PLUSmap_l125_m2_e1homalt
66.6667
50.0000
100.0000
97.4359
22200
anovak-vgINDELD16_PLUSmap_l150_m0_e0*
72.7273
57.1429
100.0000
96.6102
43400
anovak-vgINDELD16_PLUSmap_l150_m0_e0het
72.7273
57.1429
100.0000
95.1807
43400
anovak-vgINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l150_m2_e0homalt
0.0000
100.0000
00000
anovak-vgINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
100.0000
00000