PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
13701-13750 / 86044 show all
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*map_l100_m0_e0hetalt
0.0000
36.3636
0.0000
0.0000
1221000
anovak-vgINDEL*map_l100_m1_e0hetalt
0.0000
25.8065
0.0000
0.0000
3292000
anovak-vgINDEL*map_l100_m2_e0hetalt
0.0000
26.4000
0.0000
0.0000
3392000
anovak-vgINDEL*map_l100_m2_e1hetalt
0.0000
26.5152
0.0000
0.0000
3597000
anovak-vgINDEL*map_l125_m0_e0hetalt
0.0000
36.3636
0.0000
0.0000
47000
anovak-vgINDEL*map_l125_m1_e0hetalt
0.0000
37.5000
0.0000
0.0000
1525000
anovak-vgINDEL*map_l125_m2_e0hetalt
0.0000
35.7143
0.0000
0.0000
1527000
anovak-vgINDEL*map_l125_m2_e1hetalt
0.0000
34.8837
0.0000
0.0000
1528000
anovak-vgINDEL*map_l150_m0_e0hetalt
0.0000
33.3333
0.0000
0.0000
36000
anovak-vgINDEL*map_l150_m1_e0hetalt
0.0000
38.0952
0.0000
0.0000
813000
anovak-vgINDEL*map_l150_m2_e0hetalt
0.0000
38.0952
0.0000
0.0000
813000
anovak-vgINDEL*map_l150_m2_e1hetalt
0.0000
34.7826
0.0000
0.0000
815000
anovak-vgINDEL*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*map_l250_m1_e0hetalt
0.0000
33.3333
0.0000
0.0000
24000
anovak-vgINDEL*map_l250_m2_e0hetalt
0.0000
33.3333
0.0000
0.0000
24000
anovak-vgINDEL*map_l250_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
24000
anovak-vgINDEL*map_sirenhetalt
0.0000
27.5304
0.0000
0.0000
68179000
anovak-vgINDEL*segduphetalt
0.0000
21.5385
0.0000
0.0000
28102000
anovak-vgINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9973
10100
anovak-vgINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9956
10100
anovak-vgINDEL*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDEL*tech_badpromotershetalt
0.0000
50.0000
0.0000
0.0000
22000
anovak-vgINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002complexvarhomalt
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSdecoy*
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSdecoyhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
100.0000
93.3333
00100
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000