PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
12901-12950 / 86044 show all
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
83.3333
10100
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
99.9875
99.9749
100.0000
34.3760
39861398600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
92.3077
85.7143
100.0000
92.9245
3053000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
94.3262
80800
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.5000
60600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7213
20200
bgallagher-sentieonSNPtimap_l100_m0_e0hetalt
96.2963
92.8571
100.0000
65.7895
1311300
bgallagher-sentieonSNPtimap_l100_m1_e0hetalt
98.2456
96.5517
100.0000
68.8889
2812800
bgallagher-sentieonSNPtimap_l100_m2_e0hetalt
98.3051
96.6667
100.0000
70.4082
2912900
bgallagher-sentieonSNPtimap_l100_m2_e1hetalt
98.3607
96.7742
100.0000
69.6970
3013000
bgallagher-sentieonSNPtimap_l125_m0_e0hetalt
93.3333
87.5000
100.0000
73.0769
71700
bgallagher-sentieonSNPtimap_l125_m1_e0hetalt
97.8723
95.8333
100.0000
64.0625
2312300
bgallagher-sentieonSNPtimap_l125_m2_e0hetalt
97.8723
95.8333
100.0000
70.5128
2312300
bgallagher-sentieonSNPtimap_l125_m2_e1hetalt
97.8723
95.8333
100.0000
70.5128
2312300
bgallagher-sentieonSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
84.2105
30300
bgallagher-sentieonSNPtimap_l150_m1_e0hetalt
96.5517
93.3333
100.0000
70.8333
1411400
bgallagher-sentieonSNPtimap_l150_m2_e0hetalt
96.5517
93.3333
100.0000
75.0000
1411400
bgallagher-sentieonSNPtimap_l150_m2_e1hetalt
96.5517
93.3333
100.0000
75.0000
1411400
bgallagher-sentieonSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtimap_l250_m1_e0hetalt
85.7143
75.0000
100.0000
86.9565
31300
bgallagher-sentieonSNPtimap_l250_m2_e0hetalt
88.8889
80.0000
100.0000
84.6154
41400
bgallagher-sentieonSNPtimap_l250_m2_e1hetalt
88.8889
80.0000
100.0000
84.6154
41400
bgallagher-sentieonSNPtimap_sirenhetalt
98.2143
96.4912
100.0000
68.3908
5525500
bgallagher-sentieonSNPtisegduphetalt
100.0000
100.0000
100.0000
98.5185
20200
bgallagher-sentieonSNPtisegdupwithalt*
0.0000
100.0000
00000
bgallagher-sentieonSNPtisegdupwithalthet
0.0000
100.0000
00000
bgallagher-sentieonSNPtisegdupwithalthetalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtisegdupwithalthomalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtitech_badpromotershet
97.6744
95.4545
100.0000
48.1481
4224200
bgallagher-sentieonSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNPtv*hetalt
99.7699
99.5408
100.0000
40.6164
867486700
bgallagher-sentieonSNPtvHG002complexvarhetalt
99.6764
99.3548
100.0000
35.9667
308230800
bgallagher-sentieonSNPtvHG002compoundhethetalt
99.7674
99.5360
100.0000
22.4231
858485800
bgallagher-sentieonSNPtvdecoy*
0.0000
100.0000
00000
bgallagher-sentieonSNPtvdecoyhet
0.0000
100.0000
00000
bgallagher-sentieonSNPtvdecoyhetalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtvdecoyhomalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000