PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
10901-10950 / 86044 show all | |||||||||||||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 84.6154 | 2 | 1 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l125_m2_e0 | hetalt | 33.3333 | 100.0000 | 1 | 2 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l125_m2_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 88.8889 | 2 | 1 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l125_m2_e1 | hetalt | 33.3333 | 100.0000 | 1 | 2 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l125_m2_e1 | homalt | 80.0000 | 66.6667 | 100.0000 | 89.4737 | 2 | 1 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 88.8889 | 1 | 0 | 1 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m1_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 84.6154 | 2 | 1 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m2_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 87.5000 | 2 | 1 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l150_m2_e1 | homalt | 80.0000 | 66.6667 | 100.0000 | 87.5000 | 2 | 1 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_l250_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | map_siren | hetalt | 76.9231 | 62.5000 | 100.0000 | 82.1429 | 10 | 6 | 10 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | segdup | * | 94.3820 | 89.3617 | 100.0000 | 89.7311 | 42 | 5 | 42 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | segdup | het | 93.3333 | 87.5000 | 100.0000 | 87.9781 | 21 | 3 | 22 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | segdup | hetalt | 85.7143 | 75.0000 | 100.0000 | 97.0874 | 3 | 1 | 3 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | segdup | homalt | 97.2973 | 94.7368 | 100.0000 | 86.1789 | 18 | 1 | 17 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 55.5556 | 4 | 0 | 4 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 2 | 0 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I16_PLUS | tech_badpromoters | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I16_PLUS | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 2 | 0 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I1_5 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I1_5 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I1_5 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I1_5 | func_cds | * | 100.0000 | 100.0000 | 100.0000 | 25.9259 | 180 | 0 | 180 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | func_cds | het | 100.0000 | 100.0000 | 100.0000 | 21.3333 | 59 | 0 | 59 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | func_cds | hetalt | 100.0000 | 100.0000 | 100.0000 | 75.0000 | 2 | 0 | 2 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 25.6250 | 119 | 0 | 119 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | homalt | 98.3842 | 96.8198 | 100.0000 | 64.1060 | 274 | 9 | 271 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 99.8995 | 1 | 0 | 1 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 98.6486 | 1 | 0 | 1 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 96.2963 | 92.8571 | 100.0000 | 67.2000 | 78 | 6 | 82 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | homalt | 98.4772 | 97.0000 | 100.0000 | 59.4937 | 194 | 6 | 192 | 0 | 0 | ||
ltrigg-rtg1 | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 99.8980 | 1 | 0 | 1 | 0 | 0 |