PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
10851-10900 / 86044 show all
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
83.8710
72.2222
100.0000
64.4231
78307400
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
94.0476
88.7640
100.0000
63.5922
79107500
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
92.9293
86.7925
100.0000
60.7477
4674200
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
91.8919
85.0000
100.0000
57.5000
1731700
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
72.8814
1601600
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
91.8367
84.9057
100.0000
73.6544
90169300
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
88.5017
79.3750
100.0000
77.5510
1273312100
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
92.0000
22200
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
66.6667
50.0000
100.0000
92.8571
11100
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
88.8889
11100
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
90.6977
82.9787
100.0000
65.2174
3984000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
88.8889
80.0000
100.0000
68.2927
1231300
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
90.1961
82.1429
100.0000
54.1667
2352200
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.7692
40500
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
79.0698
65.3846
100.0000
85.9375
1791800
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
80.0000
66.6667
100.0000
95.1220
21200
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
78.9474
65.2174
100.0000
80.0000
1581600
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
81.4815
68.7500
100.0000
75.0000
115900
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
86.9565
76.9231
100.0000
70.0000
1031200
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
66.6667
50.0000
100.0000
75.0000
11100
ltrigg-rtg1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI16_PLUSmap_l100_m0_e0hetalt
0.0000
100.0000
01000
ltrigg-rtg1INDELI16_PLUSmap_l100_m0_e0homalt
66.6667
50.0000
100.0000
90.0000
11100
ltrigg-rtg1INDELI16_PLUSmap_l100_m1_e0hetalt
33.3333
100.0000
12000
ltrigg-rtg1INDELI16_PLUSmap_l100_m1_e0homalt
75.0000
60.0000
100.0000
81.2500
32300
ltrigg-rtg1INDELI16_PLUSmap_l100_m2_e0hetalt
33.3333
100.0000
12000
ltrigg-rtg1INDELI16_PLUSmap_l100_m2_e0homalt
75.0000
60.0000
100.0000
87.5000
32300
ltrigg-rtg1INDELI16_PLUSmap_l100_m2_e1hetalt
33.3333
100.0000
12000
ltrigg-rtg1INDELI16_PLUSmap_l100_m2_e1homalt
75.0000
60.0000
100.0000
88.0000
32300
ltrigg-rtg1INDELI16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
01000
ltrigg-rtg1INDELI16_PLUSmap_l125_m0_e0homalt
66.6667
50.0000
100.0000
88.8889
11100
ltrigg-rtg1INDELI16_PLUSmap_l125_m1_e0hetalt
33.3333
100.0000
12000