PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
10751-10800 / 86044 show all
ltrigg-rtg1INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0385
10100
ltrigg-rtg1INDELD6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15func_cds*
98.8235
97.6744
100.0000
46.8354
4214200
ltrigg-rtg1INDELD6_15func_cdshet
98.2456
96.5517
100.0000
41.6667
2812800
ltrigg-rtg1INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg1INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
52.0000
1201200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.3636
60600
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.7742
30300
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
20200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.8261
10100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
66.3717
3633800
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
71.6216
4304200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.4026
40400
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.7528
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8661
99.7326
100.0000
52.3748
373137100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.4840
98.9733
100.0000
60.3521
482547300
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8540
99.7085
100.0000
50.1462
342134100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
81.8182
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.0000
10100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
78.4024
7407300
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
92.3077
85.7143
100.0000
99.0500
3663800
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.5547
60700
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
99.5646
99.1329
100.0000
30.3228
171515170500
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
99.6431
99.2888
100.0000
35.3991
698568800
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3103
98.6301
100.0000
25.8312
576858000
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.7738
99.5485
100.0000
27.1667
441243700
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
96.7273
93.6620
100.0000
38.0282
133913200
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200het
95.6522
91.6667
100.0000
68.6567
2222100
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
96.2567
92.7835
100.0000
23.7288
9079000
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
25.0000
2102100
ltrigg-rtg1INDELD6_15map_l125_m0_e0*
96.7033
93.6170
100.0000
89.6471
4434400
ltrigg-rtg1INDELD6_15map_l125_m0_e0het
94.5455
89.6552
100.0000
88.7931
2632600
ltrigg-rtg1INDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
91.5493
60600
ltrigg-rtg1INDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
90.1639
1201200
ltrigg-rtg1INDELD6_15map_l125_m1_e0*
97.3684
94.8718
100.0000
86.2069
111610800
ltrigg-rtg1INDELD6_15map_l125_m1_e0het
96.7742
93.7500
100.0000
86.1751
6046000
ltrigg-rtg1INDELD6_15map_l125_m1_e0hetalt
97.2973
94.7368
100.0000
87.5912
1811700
ltrigg-rtg1INDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
85.3774
3313100
ltrigg-rtg1INDELD6_15map_l125_m2_e0*
97.5610
95.2381
100.0000
86.3208
120611600
ltrigg-rtg1INDELD6_15map_l125_m2_e0het
97.1014
94.3662
100.0000
86.1635
6746600
ltrigg-rtg1INDELD6_15map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
88.1944
1811700
ltrigg-rtg1INDELD6_15map_l125_m2_e0homalt
98.5915
97.2222
100.0000
85.4626
3513300
ltrigg-rtg1INDELD6_15map_l125_m2_e1*
97.1888
94.5312
100.0000
86.5052
121711700
ltrigg-rtg1INDELD6_15map_l125_m2_e1het
97.1014
94.3662
100.0000
86.4198
6746600
ltrigg-rtg1INDELD6_15map_l125_m2_e1hetalt
94.7368
90.0000
100.0000
88.5906
1821700
ltrigg-rtg1INDELD6_15map_l125_m2_e1homalt
98.6301
97.2973
100.0000
85.3448
3613400