PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
10601-10650 / 86044 show all
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
84.2105
72.7273
100.0000
89.3333
83800
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
96.7033
22300
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.9231
10200
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
66.6667
10100
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
02000
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
94.4444
89.4737
100.0000
81.2500
1721800
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.5927
99.1886
100.0000
51.1512
489448800
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.4413
98.8889
100.0000
55.5369
267326500
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.6522
91.6667
100.0000
70.0000
1111200
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
41.8733
211021100
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.0164
98.0519
100.0000
48.4429
453944700
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
98.0843
96.2406
100.0000
50.7732
3841538200
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
99.4220
98.8506
100.0000
71.4777
8618300
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
99.0291
98.0769
100.0000
73.0769
5114900
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
64.7059
1201200
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
70.6667
2302200
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
82.6667
70.4545
100.0000
95.9420
31132800
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
92.8571
86.6667
100.0000
95.4225
1321300
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
99.0354
98.0892
100.0000
53.7037
154315000
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
99.1736
98.3607
100.0000
66.4671
6015600
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
99.0099
98.0392
100.0000
32.8947
5015100
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
98.8764
97.7778
100.0000
46.9136
4414300
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
93.6170
88.0000
100.0000
26.6667
2232200
ltrigg-rtg1INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
27.7778
1301300
ltrigg-rtg1INDELD16_PLUSmap_l100_m0_e0hetalt
85.7143
75.0000
100.0000
86.9565
31300
ltrigg-rtg1INDELD16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
90.5660
50500
ltrigg-rtg1INDELD16_PLUSmap_l100_m1_e0hetalt
89.3617
80.7692
100.0000
72.7273
2151800
ltrigg-rtg1INDELD16_PLUSmap_l100_m1_e0homalt
88.8889
80.0000
100.0000
87.3786
1231300
ltrigg-rtg1INDELD16_PLUSmap_l100_m2_e0hetalt
89.3617
80.7692
100.0000
72.7273
2151800
ltrigg-rtg1INDELD16_PLUSmap_l100_m2_e0homalt
85.7143
75.0000
100.0000
88.2883
1241300
ltrigg-rtg1INDELD16_PLUSmap_l100_m2_e1hetalt
86.7925
76.6667
100.0000
71.4286
2372000
ltrigg-rtg1INDELD16_PLUSmap_l100_m2_e1homalt
85.7143
75.0000
100.0000
88.4956
1241300
ltrigg-rtg1INDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
92.3077
10100
ltrigg-rtg1INDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
93.3333
20200
ltrigg-rtg1INDELD16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
91.3043
21200
ltrigg-rtg1INDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
92.4528
40400
ltrigg-rtg1INDELD16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
91.3043
21200
ltrigg-rtg1INDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
92.9825
40400
ltrigg-rtg1INDELD16_PLUSmap_l125_m2_e1hetalt
66.6667
50.0000
100.0000
91.6667
22200
ltrigg-rtg1INDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
92.9825
40400
ltrigg-rtg1INDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
93.7500
10100
ltrigg-rtg1INDELD16_PLUSmap_l150_m1_e0homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD16_PLUSmap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.7500
10100
ltrigg-rtg1INDELD16_PLUSmap_l150_m2_e0homalt
0.0000
100.0000
00000