PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
9751-9800 / 86044 show all
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.5760
5305300
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
67.2414
1911900
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.5052
1601600
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.7431
84.7458
100.0000
72.5389
5095300
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
66.6667
11200
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
100.0000
100.0000
100.0000
88.5496
1501500
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
96.7552
93.7143
100.0000
65.3445
1641116600
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
89.3617
80.7692
100.0000
91.3934
2152100
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
66.6667
100.0000
21000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
90.4762
82.6087
100.0000
74.0741
1942100
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
67.5000
1301300
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
83.6735
80800
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
66.6667
50.0000
100.0000
85.7143
22200
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
02000
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
60.0000
20200
jmaeng-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
91.6667
10100
jmaeng-gatkINDELI16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
98.5915
20200
jmaeng-gatkINDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
93.7500
21200
jmaeng-gatkINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
94.2857
21200
jmaeng-gatkINDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
94.4444
21200
jmaeng-gatkINDELI16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
87.5000
10100
jmaeng-gatkINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.4252
20200
jmaeng-gatkINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
91.3043
21200
jmaeng-gatkINDELI16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.3333
30300
jmaeng-gatkINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
92.0000
21200
jmaeng-gatkINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
92.0000
21200
jmaeng-gatkINDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100
jmaeng-gatkINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
99.0826
10100
jmaeng-gatkINDELI16_PLUSmap_l150_m1_e0hetalt
66.6667
50.0000
100.0000
94.1176
11100
jmaeng-gatkINDELI16_PLUSmap_l150_m1_e0homalt
100.0000
100.0000
100.0000
98.0645
30300
jmaeng-gatkINDELI16_PLUSmap_l150_m2_e0hetalt
66.6667
50.0000
100.0000
94.4444
11100
jmaeng-gatkINDELI16_PLUSmap_l150_m2_e0homalt
100.0000
100.0000
100.0000
98.2036
30300