PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
9651-9700 / 86044 show all
jmaeng-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
57.0000
4304300
jmaeng-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
56.0606
2902900
jmaeng-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jmaeng-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
58.6207
1201200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1831
60600
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8102
30300
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.2456
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.6667
84.6154
100.0000
59.7561
3363300
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8723
40400
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3740
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.0000
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.8571
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0388
7407400
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1758
90900
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.1364
98.2877
100.0000
18.5552
5741057500
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
21.1864
9349300
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
40.0000
2102100
jmaeng-gatkINDELD6_15map_l100_m0_e0hetalt
97.2973
94.7368
100.0000
83.4862
1811800
jmaeng-gatkINDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
90.3361
2312300
jmaeng-gatkINDELD6_15map_l100_m1_e0hetalt
95.3846
91.1765
100.0000
74.4856
6266200
jmaeng-gatkINDELD6_15map_l100_m2_e0hetalt
95.3846
91.1765
100.0000
75.6863
6266200
jmaeng-gatkINDELD6_15map_l100_m2_e1hetalt
94.9640
90.4110
100.0000
75.3731
6676600
jmaeng-gatkINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.9091
60600
jmaeng-gatkINDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
92.8571
1201200
jmaeng-gatkINDELD6_15map_l125_m1_e0hetalt
97.2973
94.7368
100.0000
86.0465
1811800
jmaeng-gatkINDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
89.4569
3313300
jmaeng-gatkINDELD6_15map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
87.4126
1811800
jmaeng-gatkINDELD6_15map_l125_m2_e0homalt
98.5915
97.2222
100.0000
89.5522
3513500
jmaeng-gatkINDELD6_15map_l125_m2_e1hetalt
94.7368
90.0000
100.0000
87.7551
1821800
jmaeng-gatkINDELD6_15map_l125_m2_e1homalt
98.6301
97.2973
100.0000
89.4737
3613600
jmaeng-gatkINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
91.2281
50500
jmaeng-gatkINDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
94.7761
70700
jmaeng-gatkINDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.7526
80800
jmaeng-gatkINDELD6_15map_l150_m1_e0homalt
98.0392
96.1538
100.0000
89.7119
2512500
jmaeng-gatkINDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.6606
80800
jmaeng-gatkINDELD6_15map_l150_m2_e0homalt
98.1818
96.4286
100.0000
90.0000
2712700