PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
701-750 / 86044 show all
anovak-vgINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
7.4541
0.0000
0.0000
65807000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
21.6216
0.0000
0.0000
829000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
11.1111
0.0000
0.0000
18000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
31.9797
0.0000
0.0000
378804000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
16.1412
0.0000
0.0000
128665000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
40.5822
0.0000
0.0000
237347000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
16.4948
0.0000
0.0000
1681000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15map_l100_m0_e0hetalt
0.0000
21.0526
0.0000
0.0000
415000
anovak-vgINDELD6_15map_l100_m1_e0hetalt
0.0000
22.0588
0.0000
0.0000
1553000
anovak-vgINDELD6_15map_l100_m2_e0hetalt
0.0000
22.0588
0.0000
0.0000
1553000
anovak-vgINDELD6_15map_l100_m2_e1hetalt
0.0000
21.9178
0.0000
0.0000
1657000
anovak-vgINDELD6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
06000
anovak-vgINDELD6_15map_l125_m1_e0hetalt
0.0000
31.5789
0.0000
0.0000
613000
anovak-vgINDELD6_15map_l125_m2_e0hetalt
0.0000
31.5789
0.0000
0.0000
613000
anovak-vgINDELD6_15map_l125_m2_e1hetalt
0.0000
30.0000
0.0000
0.0000
614000
anovak-vgINDELD6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
05000
anovak-vgINDELD6_15map_l150_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
26000
anovak-vgINDELD6_15map_l150_m2_e0hetalt
0.0000
25.0000
0.0000
0.0000
26000
anovak-vgINDELD6_15map_l150_m2_e1hetalt
0.0000
22.2222
0.0000
0.0000
27000
anovak-vgINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7213
20200
anovak-vgINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15map_sirenhetalt
0.0000
25.2525
0.0000
0.0000
2574000
anovak-vgINDELD6_15segduphetalt
0.0000
18.3673
0.0000
0.0000
940000
anovak-vgINDELD6_15segdupwithalt*
0.0000
100.0000
00000
anovak-vgINDELD6_15segdupwithalthet
0.0000
100.0000
00000
anovak-vgINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELD6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELI16_PLUS*hetalt
0.0000
7.1020
0.0000
0.0000
1491949000
anovak-vgINDELI16_PLUSHG002complexvarhetalt
0.0000
5.6716
0.0000
0.0000
19316000
anovak-vgINDELI16_PLUSHG002compoundhethetalt
0.0000
7.1190
0.0000
0.0000
1491944000
anovak-vgINDELI16_PLUSdecoy*
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSfunc_cdshet
50.0000
33.3333
100.0000
0.0000
36300
anovak-vgINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
086000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000