PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
5651-5700 / 86044 show all | |||||||||||||||
| qzeng-custom | INDEL | I16_PLUS | tech_badpromoters | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I16_PLUS | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 60.0000 | 2 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | func_cds | hetalt | 100.0000 | 100.0000 | 100.0000 | 0.0000 | 2 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 25.6098 | 119 | 0 | 122 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 85.7143 | 75.0000 | 100.0000 | 58.0247 | 63 | 21 | 34 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | hetalt | 92.8230 | 86.6071 | 100.0000 | 66.1202 | 97 | 15 | 62 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 93.8053 | 88.3333 | 100.0000 | 71.2121 | 53 | 7 | 38 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 25.1397 | 100.0000 | 45 | 134 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 0.0000 | 100.0000 | 80.0000 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_6to10 | hetalt | 96.5630 | 93.3544 | 100.0000 | 65.8940 | 295 | 21 | 412 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | * | 86.3636 | 76.0000 | 100.0000 | 78.9474 | 19 | 6 | 4 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | het | 66.6667 | 50.0000 | 100.0000 | 75.0000 | 1 | 1 | 4 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 78.2609 | 100.0000 | 18 | 5 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | map_l100_m0_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 92.1739 | 6 | 3 | 9 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l100_m1_e0 | hetalt | 87.1795 | 77.2727 | 100.0000 | 89.4180 | 34 | 10 | 20 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l100_m2_e0 | hetalt | 87.1795 | 77.2727 | 100.0000 | 90.2439 | 34 | 10 | 20 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l100_m2_e1 | hetalt | 87.5000 | 77.7778 | 100.0000 | 90.4306 | 35 | 10 | 20 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l125_m0_e0 | hetalt | 66.6667 | 50.0000 | 100.0000 | 96.6292 | 2 | 2 | 3 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l125_m1_e0 | hetalt | 86.6667 | 76.4706 | 100.0000 | 91.4474 | 13 | 4 | 13 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l125_m2_e0 | hetalt | 88.2353 | 78.9474 | 100.0000 | 91.7160 | 15 | 4 | 14 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l125_m2_e1 | hetalt | 88.2353 | 78.9474 | 100.0000 | 91.8605 | 15 | 4 | 14 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l150_m0_e0 | hetalt | 33.3333 | 100.0000 | 1 | 2 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | map_l150_m1_e0 | hetalt | 71.4286 | 55.5556 | 100.0000 | 95.0820 | 5 | 4 | 6 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l150_m2_e0 | hetalt | 71.4286 | 55.5556 | 100.0000 | 94.8529 | 5 | 4 | 7 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l150_m2_e1 | hetalt | 75.0000 | 60.0000 | 100.0000 | 94.8905 | 6 | 4 | 7 | 0 | 0 | ||
| qzeng-custom | INDEL | I1_5 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||