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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FP FP gt% FP ma
52151-52200 / 86044 show all
ckim-dragenINDELD1_5map_l100_m2_e0homalt
99.1774
98.6907
99.6689
83.7284
603860222
100.0000
ckim-dragenINDELD1_5map_l100_m2_e1homalt
99.1894
98.7097
99.6737
83.7831
612861122
100.0000
ckim-dragenINDELD1_5map_l125_m0_e0homalt
97.6109
96.6216
98.6207
86.7338
143514322
100.0000
ckim-dragenINDELD1_5map_l125_m1_e0homalt
98.7005
97.9943
99.4169
85.1515
342734122
100.0000
ckim-dragenINDELD1_5map_l125_m2_e0homalt
98.7544
98.0769
99.4413
85.9828
357735622
100.0000
ckim-dragenINDELD1_5map_l125_m2_e1homalt
98.7814
98.1183
99.4536
85.9716
365736422
100.0000
ckim-dragenINDELD1_5map_l150_m2_e1homalt
98.7838
98.3871
99.1837
88.0020
244424322
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
98.3133
97.6077
99.0291
77.5109
204520422
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.4371
99.6241
99.2509
82.8296
265126521
50.0000
ckim-dragenINDELD6_15map_l150_m0_e0*
95.3846
96.8750
93.9394
94.4162
3113120
0.0000
ckim-dragenINDELD6_15map_l150_m0_e0het
95.2381
100.0000
90.9091
94.3005
2002020
0.0000
ckim-dragenINDELD6_15map_l150_m1_e0*
96.5517
95.8904
97.2222
93.0165
7037020
0.0000
ckim-dragenINDELD6_15map_l150_m1_e0het
97.5000
100.0000
95.1220
93.8806
3903920
0.0000
ckim-dragenINDELD6_15map_l150_m2_e0*
96.9325
96.3415
97.5309
93.1646
7937920
0.0000
ckim-dragenINDELD6_15map_l150_m2_e0het
97.8723
100.0000
95.8333
93.8303
4604620
0.0000
ckim-dragenINDELD6_15map_l150_m2_e1*
96.4286
95.2941
97.5904
93.1800
8148120
0.0000
ckim-dragenINDELD6_15map_l150_m2_e1het
97.9167
100.0000
95.9184
93.8826
4704720
0.0000
ckim-dragenINDELI16_PLUSHG002complexvarhet
99.0099
98.3459
99.6830
64.2493
6541162921
50.0000
ckim-dragenINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
97.2565
96.8421
97.6744
90.7527
9238420
0.0000
ckim-dragenINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
96.1538
100.0000
92.5926
92.0118
2502522
100.0000
ckim-dragenINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.8216
96.0549
99.6546
66.2784
5602357722
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.7620
95.9029
99.6947
70.9147
6322765322
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
99.0826
100.0000
98.1818
88.6831
108010820
0.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.4615
100.0000
96.9697
88.5017
6606420
0.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
92.7711
88.5057
97.4684
85.1504
77107722
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
50.0000
100.0000
33.3333
94.8276
10122
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.3885
93.5484
99.4065
59.1515
3192233522
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.9736
94.7552
99.2982
55.3292
2711528322
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.9094
96.7480
99.0991
88.2228
238822020
0.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.6296
93.9474
99.4695
63.7151
3572337522
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.7620
95.9029
99.6947
70.9147
6322765322
100.0000
ckim-dragenINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
96.5177
93.9068
99.2780
66.5459
2621727522
100.0000
ckim-dragenINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
95.8314
95.7447
95.9184
80.7087
4524720
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m0_e0*
91.6667
100.0000
84.6154
93.0108
1101120
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m1_e0het
91.8919
94.4444
89.4737
93.6242
1711720
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m2_e0het
91.8919
94.4444
89.4737
94.6328
1711720
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m2_e0homalt
83.3333
100.0000
71.4286
95.1724
50520
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m2_e1het
91.8919
94.4444
89.4737
94.7075
1711720
0.0000
ckim-dragenINDELI16_PLUSmap_l100_m2_e1homalt
83.3333
100.0000
71.4286
95.2055
50520
0.0000
ckim-dragenINDELI16_PLUSmap_l125_m0_e0*
85.7143
100.0000
75.0000
93.7500
60620
0.0000
ckim-dragenINDELI16_PLUSmap_l125_m1_e0*
90.3226
93.3333
87.5000
94.3662
1411420
0.0000
ckim-dragenINDELI16_PLUSmap_l125_m2_e0*
90.3226
93.3333
87.5000
95.4286
1411420
0.0000
ckim-dragenINDELI16_PLUSmap_l125_m2_e1*
90.3226
93.3333
87.5000
95.4416
1411420
0.0000
ckim-dragenINDELI16_PLUSmap_l150_m2_e1*
86.9565
90.9091
83.3333
95.3668
1011020
0.0000
ckim-dragenINDELI1_5*hetalt
96.2953
92.8718
99.9809
60.6438
103977981045122
100.0000
ckim-dragenINDELI1_5HG002compoundhethetalt
96.3036
92.8872
99.9808
55.1746
103827951043222
100.0000
ckim-dragenINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.6112
99.4825
99.7403
78.0188
769476820
0.0000
ckim-dragenINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7895
100.0000
99.5798
75.7761
478047422
100.0000
ckim-dragenINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.7904
99.7906
99.7901
80.0042
953295121
50.0000
ckim-dragenINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8967
100.0000
99.7936
64.0045
968096722
100.0000