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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1038 1039 1040 1041 1042 1043 1044 1045 1046 ... 1720 1721 » 52051-52100 / 86044 show all
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	82.7698	70.8758	99.4609	27.5391	348	143	369	2	2	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	60.4000	196	1	196	2	1	50.0000
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	*	96.6443	96.0000	97.2973	64.5933	72	3	72	2	1	50.0000
ckim-gatk	INDEL	D1_5	map_l125_m0_e0	homalt	98.9899	99.3243	98.6577	87.4685	147	1	147	2	2	100.0000
ckim-gatk	INDEL	D1_5	map_l125_m1_e0	homalt	99.2826	99.1404	99.4253	85.7785	346	3	346	2	2	100.0000
ckim-gatk	INDEL	D1_5	map_l125_m2_e0	homalt	99.3122	99.1758	99.4490	86.4855	361	3	361	2	2	100.0000
ckim-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	99.3271	99.1935	99.4609	86.4599	369	3	369	2	2	100.0000
ckim-gatk	INDEL	D1_5	map_l150_m2_e1	homalt	98.9899	98.7903	99.1903	88.6018	245	3	245	2	2	100.0000
ckim-gatk	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5493	359	0	359	2	2	100.0000
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	88.0242	78.7844	99.7191	26.2176	687	185	710	2	2	100.0000
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.2481	99.2481	99.2481	82.9814	264	2	264	2	1	50.0000
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.6618	99.7743	99.5495	35.0877	442	1	442	2	2	100.0000
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	*	97.5038	96.4789	98.5507	45.6693	137	5	136	2	1	50.0000
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	het	93.7037	95.8333	91.6667	76.2376	23	1	22	2	1	50.0000
ckim-gatk	INDEL	I16_PLUS	HG002complexvar	hetalt	96.6468	94.0299	99.4135	66.8932	315	20	339	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	95.8494	92.1166	99.8975	44.7808	1928	165	1950	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	96.1564	94.7368	97.6190	90.9968	90	5	82	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.1538	100.0000	92.5926	92.7224	25	0	25	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.3739	93.3105	99.6454	63.1854	544	39	562	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.4002	93.3232	99.6870	67.8894	615	44	637	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.6744	97.2222	98.1308	89.4789	105	3	105	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	96.9223	96.9697	96.8750	89.3864	64	2	62	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	92.1212	87.3563	97.4359	84.8544	76	11	76	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	50.0000	100.0000	33.3333	95.0820	1	0	1	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	94.9615	90.9091	99.3921	56.0160	310	31	327	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	95.2891	91.6084	99.2780	52.0761	262	24	275	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	94.9242	90.7895	99.4536	60.9392	345	35	364	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.4002	93.3232	99.6870	67.8894	615	44	637	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	94.9718	91.0394	99.2593	62.7586	254	25	268	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	93.5687	91.4894	95.7447	81.3492	43	4	45	2	1	50.0000
ckim-gatk	INDEL	I16_PLUS	map_l100_m2_e0	het	91.8919	94.4444	89.4737	95.6522	17	1	17	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	map_l100_m2_e1	het	91.8919	94.4444	89.4737	95.6720	17	1	17	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	map_l125_m2_e0	*	90.3226	93.3333	87.5000	97.2556	14	1	14	2	0	0.0000
ckim-gatk	INDEL	I16_PLUS	map_l125_m2_e1	*	90.3226	93.3333	87.5000	97.2603	14	1	14	2	0	0.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.1713	92.6560	99.9638	35.0529	5463	433	5525	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.6563	770	3	770	2	0	0.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7912	100.0000	99.5833	75.9880	478	0	478	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6855	99.5812	99.7901	80.3667	951	4	951	2	1	50.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.1468	92.6189	99.9541	23.6736	4304	343	4357	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.8132	93.8694	99.9475	22.1609	3782	247	3809	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.0708	92.4769	99.9552	27.1601	4413	359	4466	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.1713	92.6560	99.9638	35.0529	5463	433	5525	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	*	78.7206	65.5340	98.5507	56.6038	135	71	136	2	1	50.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8968	100.0000	99.7938	64.2989	968	0	968	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	*	95.3668	91.8216	99.1968	76.6417	247	22	247	2	1	50.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.6269	100.0000	99.2565	66.2060	267	0	267	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l150_m0_e0	homalt	98.5294	100.0000	97.1014	89.4009	67	0	67	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m1_e0	homalt	97.7778	100.0000	95.6522	94.3696	44	0	44	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m2_e0	homalt	97.8261	100.0000	95.7447	95.1696	45	0	45	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m2_e1	homalt	97.8723	100.0000	95.8333	95.1759	46	0	46	2	2	100.0000

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