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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1024 1025 1026 1027 1028 1029 1030 1031 1032 ... 1720 1721 » 51351-51400 / 86044 show all
ckim-isaac	INDEL	I1_5	map_l150_m1_e0	homalt	70.1299	54.5455	98.1818	84.2632	108	90	108	2	0	0.0000
ckim-isaac	INDEL	I1_5	map_l150_m2_e0	het	82.4197	70.5502	99.0909	92.6224	218	91	218	2	1	50.0000
ckim-isaac	INDEL	I1_5	map_l150_m2_e0	homalt	69.8718	54.2289	98.1982	86.5942	109	92	109	2	0	0.0000
ckim-isaac	INDEL	I1_5	map_l150_m2_e1	het	82.5046	70.6625	99.1150	92.6095	224	93	224	2	1	50.0000
ckim-isaac	INDEL	I1_5	map_l150_m2_e1	homalt	70.4403	54.9020	98.2456	86.5882	112	92	112	2	0	0.0000
ckim-isaac	INDEL	I1_5	segdup	homalt	97.0748	94.7146	99.5556	90.3516	448	25	448	2	2	100.0000
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	67.3433	50.9434	99.3151	42.0635	270	260	290	2	1	50.0000
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	88.0734	81.3559	96.0000	63.2353	48	11	48	2	1	50.0000
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	76.5438	63.9344	95.3488	51.1364	39	22	41	2	1	50.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7238	100.0000	99.4490	62.9592	361	0	361	2	1	50.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	97.9592	100.0000	96.0000	88.3178	52	0	48	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2375	99.0025	99.4737	82.2678	397	4	378	2	1	50.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	99.3671	100.0000	98.7421	70.8257	157	0	157	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	98.3051	100.0000	96.6667	82.3529	61	0	58	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	94.5055	93.4783	95.5556	67.1533	43	3	43	2	2	100.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m1_e0	homalt	90.3226	93.3333	87.5000	96.2264	14	1	14	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m2_e0	homalt	90.9091	93.7500	88.2353	96.7118	15	1	15	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m2_e1	homalt	90.9091	93.7500	88.2353	96.7433	15	1	15	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l125_m1_e0	*	96.4286	100.0000	93.1034	97.3098	27	0	27	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l125_m2_e0	*	96.4286	100.0000	93.1034	97.7147	27	0	27	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l125_m2_e1	*	94.7368	96.4286	93.1034	97.7658	27	1	27	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l150_m1_e0	*	93.7500	100.0000	88.2353	97.7212	15	0	15	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l150_m2_e0	*	94.4444	100.0000	89.4737	97.8604	17	0	17	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l150_m2_e1	*	91.8919	94.4444	89.4737	97.9006	17	1	17	2	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_siren	homalt	95.6522	97.0588	94.2857	94.7368	33	1	33	2	0	0.0000
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	82.7698	70.8758	99.4609	27.5391	348	143	369	2	2	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	60.4000	196	1	196	2	1	50.0000
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	*	96.6443	96.0000	97.2973	64.5933	72	3	72	2	1	50.0000
ckim-vqsr	INDEL	D1_5	map_l125_m0_e0	homalt	98.9899	99.3243	98.6577	87.4685	147	1	147	2	2	100.0000
ckim-vqsr	INDEL	D1_5	map_l125_m1_e0	homalt	99.2826	99.1404	99.4253	85.7785	346	3	346	2	2	100.0000
ckim-vqsr	INDEL	D1_5	map_l125_m2_e0	homalt	99.3122	99.1758	99.4490	86.4855	361	3	361	2	2	100.0000
ckim-vqsr	INDEL	D1_5	map_l125_m2_e1	homalt	99.3271	99.1935	99.4609	86.4599	369	3	369	2	2	100.0000
ckim-vqsr	INDEL	D1_5	map_l150_m2_e1	homalt	98.9899	98.7903	99.1903	88.6018	245	3	245	2	2	100.0000
ckim-vqsr	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5493	359	0	359	2	2	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	88.0242	78.7844	99.7191	26.2176	687	185	710	2	2	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.6618	99.7743	99.5495	35.0877	442	1	442	2	2	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	*	97.5038	96.4789	98.5507	45.6693	137	5	136	2	1	50.0000
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	het	93.7037	95.8333	91.6667	76.2376	23	1	22	2	1	50.0000
ckim-vqsr	INDEL	D6_15	map_l125_m0_e0	*	96.8421	97.8723	95.8333	94.9045	46	1	46	2	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l125_m0_e0	het	94.9153	96.5517	93.3333	95.7204	28	1	28	2	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	*	96.9697	100.0000	94.1176	95.6242	32	0	32	2	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	het	95.2381	100.0000	90.9091	96.1938	20	0	20	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	hetalt	96.6468	94.0299	99.4135	66.8932	315	20	339	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	hetalt	95.7976	92.0210	99.8974	44.8061	1926	167	1948	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.8838	90.5263	97.5000	91.3886	86	9	78	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.1538	100.0000	92.5926	92.7224	25	0	25	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.2821	93.1389	99.6448	63.2266	543	40	561	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.3190	93.1715	99.6865	67.9236	614	45	636	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	95.7346	93.5185	98.0583	89.8322	101	7	101	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	93.6995	90.9091	96.6667	89.9833	60	6	58	2	0	0.0000

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