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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1013 1014 1015 1016 1017 1018 1019 1020 1021 ... 1720 1721 » 50801-50850 / 86044 show all
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	55.5556	40.0000	90.9091	92.7869	20	30	20	2	1	50.0000
gduggal-bwaplat	INDEL	*	map_l125_m0_e0	*	66.9676	50.4535	99.5526	96.3322	445	437	445	2	0	0.0000
gduggal-bwaplat	INDEL	*	map_l125_m0_e0	het	68.5268	52.2998	99.3528	96.8009	307	280	307	2	0	0.0000
gduggal-bwaplat	INDEL	*	segdup	homalt	95.8873	92.2917	99.7745	93.8089	886	74	885	2	2	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	69.8324	53.8020	99.4695	52.3990	375	322	375	2	2	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	60.3108	43.3915	98.8571	88.9937	174	227	173	2	0	0.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	67.9174	51.7143	98.9071	58.0275	181	169	181	2	2	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	map_siren	*	70.5357	55.2448	97.5309	95.0185	79	64	79	2	2	100.0000
gduggal-bwaplat	INDEL	D16_PLUS	map_siren	het	78.7879	66.6667	96.2963	95.7447	52	26	52	2	2	100.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	78.7591	65.2015	99.4350	82.5616	356	190	352	2	1	50.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	74.0849	62.1622	91.6667	93.6508	23	14	22	2	2	100.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	74.4454	59.6206	99.0826	87.0083	220	149	216	2	1	50.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	38.0952	23.6253	98.3051	64.2424	116	375	116	2	2	100.0000
gduggal-bwaplat	INDEL	D1_5	map_l100_m1_e0	homalt	78.8991	65.3716	99.4859	87.5000	387	205	387	2	1	50.0000
gduggal-bwaplat	INDEL	D1_5	map_l100_m2_e0	homalt	79.4494	66.1211	99.5074	87.9739	404	207	404	2	1	50.0000
gduggal-bwaplat	INDEL	D1_5	map_l100_m2_e1	homalt	79.4574	66.1290	99.5146	88.0476	410	210	410	2	1	50.0000
gduggal-bwaplat	INDEL	D1_5	map_l125_m0_e0	*	69.6335	53.6290	99.2537	95.9184	266	230	266	2	0	0.0000
gduggal-bwaplat	INDEL	D1_5	map_l125_m0_e0	het	70.5224	54.7826	98.9529	96.3515	189	156	189	2	0	0.0000
eyeh-varpipe	INDEL	I6_15	map_l150_m1_e0	homalt	88.0309	85.7143	90.4762	85.3147	6	1	19	2	2	100.0000
eyeh-varpipe	INDEL	I6_15	map_l150_m2_e0	homalt	88.5906	85.7143	91.6667	85.6287	6	1	22	2	2	100.0000
eyeh-varpipe	INDEL	I6_15	map_l150_m2_e1	homalt	89.5349	87.5000	91.6667	85.8824	7	1	22	2	2	100.0000
eyeh-varpipe	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.0385	100.0000	98.0952	76.5101	5	0	103	2	2	100.0000
eyeh-varpipe	SNP	*	map_l100_m1_e0	hetalt	99.6622	100.0000	99.3266	65.7044	41	0	295	2	1	50.0000
eyeh-varpipe	SNP	*	map_l100_m2_e0	hetalt	99.6753	100.0000	99.3528	67.7116	42	0	307	2	1	50.0000
eyeh-varpipe	SNP	*	map_l100_m2_e1	hetalt	99.6805	100.0000	99.3631	67.6289	43	0	312	2	1	50.0000
eyeh-varpipe	SNP	*	map_l250_m0_e0	homalt	99.6776	99.6820	99.6732	93.5320	627	2	610	2	2	100.0000
eyeh-varpipe	SNP	ti	HG002compoundhet	hetalt	99.8980	99.8273	99.9687	18.5958	578	1	6398	2	1	50.0000
eyeh-varpipe	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	*	0.0000	0.0000	33.3333	99.9533	0	0	1	2	0	0.0000
eyeh-varpipe	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	0.0000	0.0000	33.3333	99.8458	0	0	1	2	0	0.0000
eyeh-varpipe	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.0392	100.0000	96.1538	79.7665	1	0	50	2	2	100.0000
eyeh-varpipe	SNP	ti	map_l250_m1_e0	homalt	99.8123	99.7511	99.8737	88.1405	1603	4	1581	2	2	100.0000
eyeh-varpipe	SNP	ti	map_l250_m2_e0	homalt	99.8276	99.7713	99.8839	88.9360	1745	4	1721	2	2	100.0000
eyeh-varpipe	SNP	ti	map_l250_m2_e1	homalt	99.8298	99.7743	99.8854	88.9822	1768	4	1743	2	2	100.0000
eyeh-varpipe	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	99.7015	100.0000	99.4048	74.4681	13	0	334	2	1	50.0000
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	99.3243	100.0000	98.6577	87.6860	15	0	147	2	1	50.0000
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.5789	99.5842	99.5736	56.7742	479	2	467	2	1	50.0000
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	99.3243	100.0000	98.6577	87.6860	15	0	147	2	1	50.0000
eyeh-varpipe	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	*	50.0000	100.0000	33.3333	94.5455	1	0	1	2	0	0.0000
eyeh-varpipe	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	het	50.0000	100.0000	33.3333	92.8571	1	0	1	2	0	0.0000
eyeh-varpipe	SNP	tv	map_l100_m1_e0	hetalt	99.3548	100.0000	98.7179	69.3517	41	0	154	2	1	50.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e0	hetalt	99.3865	100.0000	98.7805	70.8703	42	0	162	2	1	50.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e1	hetalt	99.4012	100.0000	98.8095	70.6294	43	0	166	2	1	50.0000
eyeh-varpipe	SNP	tv	map_l250_m1_e0	homalt	99.6477	99.5327	99.7630	89.0347	852	4	842	2	2	100.0000
eyeh-varpipe	SNP	tv	map_l250_m2_e0	homalt	99.6784	99.5731	99.7840	89.6709	933	4	924	2	2	100.0000
eyeh-varpipe	SNP	tv	map_l250_m2_e1	homalt	99.6815	99.5772	99.7861	89.7714	942	4	933	2	2	100.0000
gduggal-bwafb	INDEL	*	segdup	hetalt	91.3096	87.6923	95.2381	96.9828	114	16	40	2	2	100.0000
gduggal-bwafb	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	97.5000	0	0	0	2	0	0.0000
gduggal-bwafb	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	50.0000	100.0000	33.3333	99.1549	1	0	1	2	0	0.0000
gduggal-bwafb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	98.9796	0	0	0	2	0	0.0000
gduggal-bwafb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	98.8950	0	0	0	2	0	0.0000

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