PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
49251-49300 / 86044 show all
gduggal-bwafbINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9910
10100
gduggal-bwafbINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
40.6250
1901900
gduggal-bwafbINDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
41.1765
801000
gduggal-bwafbINDELD1_5tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
20000
gduggal-bwafbINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
40.0000
90900
gduggal-bwafbINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9165
10100
gduggal-bwafbINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.8913
00100
gduggal-bwafbINDELD6_15decoyhetalt
100.0000
100.0000
10000
gduggal-bwafbINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-bwafbINDELD6_15func_cdshetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-bwafbINDELD6_15func_cdshomalt
90.9091
83.3333
100.0000
61.5385
1021000
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.7444
30300
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.4000
20200
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
88.8889
80.0000
100.0000
74.6479
44111800
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
90.0000
81.8182
100.0000
69.2308
2761200
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
88.8889
11100
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
87.5000
10100
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-bwaplatINDEL*map_l125_m2_e1homalt
71.4286
55.5556
100.0000
91.6796
43034443000
gduggal-bwaplatINDEL*map_l150_m0_e0hetalt
50.0000
33.3333
100.0000
99.1453
36300
gduggal-bwaplatINDEL*map_l150_m0_e0homalt
57.3913
40.2439
100.0000
96.0667
66986600
gduggal-bwaplatINDEL*map_l150_m1_e0hetalt
64.5161
47.6190
100.0000
98.4615
10111000
gduggal-bwaplatINDEL*map_l150_m1_e0homalt
64.3172
47.4026
100.0000
93.7819
21924321900
gduggal-bwaplatINDEL*map_l150_m2_e0hetalt
64.5161
47.6190
100.0000
98.6431
10111000
gduggal-bwaplatINDEL*map_l150_m2_e0homalt
65.0771
48.2328
100.0000
94.2130
23224923200
gduggal-bwaplatINDEL*map_l150_m2_e1hetalt
64.7059
47.8261
100.0000
98.5430
11121100
gduggal-bwaplatINDEL*map_l150_m2_e1homalt
65.5738
48.7805
100.0000
94.1449
24025224000
gduggal-bwaplatINDEL*map_l250_m0_e0*
47.0588
30.7692
100.0000
99.5667
24542400
gduggal-bwaplatINDEL*map_l250_m0_e0het
50.7042
33.9623
100.0000
99.5919
18351800
gduggal-bwaplatINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-bwaplatINDEL*map_l250_m0_e0homalt
38.7097
24.0000
100.0000
99.3555
619600
gduggal-bwaplatINDEL*map_l250_m1_e0*
56.4706
39.3443
100.0000
98.8721
12018512000
gduggal-bwaplatINDEL*map_l250_m1_e0het
58.7361
41.5789
100.0000
99.0493
791117900
gduggal-bwaplatINDEL*map_l250_m1_e0hetalt
50.0000
33.3333
100.0000
99.4937
24200
gduggal-bwaplatINDEL*map_l250_m1_e0homalt
52.7027
35.7798
100.0000
97.9835
39703900
gduggal-bwaplatINDEL*map_l250_m2_e0*
58.5470
41.3897
100.0000
98.8731
13719413700
gduggal-bwaplatINDEL*map_l250_m2_e0het
60.4651
43.3333
100.0000
99.0381
911199100
gduggal-bwaplatINDEL*map_l250_m2_e0hetalt
50.0000
33.3333
100.0000
99.5680
24200
gduggal-bwaplatINDEL*map_l250_m2_e0homalt
55.3459
38.2609
100.0000
98.0304
44714400
gduggal-bwaplatINDEL*map_l250_m2_e1*
58.8983
41.7417
100.0000
98.8871
13919413900
gduggal-bwaplatINDEL*map_l250_m2_e1het
60.7261
43.6019
100.0000
99.0542
921199200
gduggal-bwaplatINDEL*map_l250_m2_e1hetalt
50.0000
33.3333
100.0000
99.5763
24200
gduggal-bwaplatINDEL*map_l250_m2_e1homalt
55.9006
38.7931
100.0000
98.0358
45714500
gduggal-bwaplatINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9980
10100
gduggal-bwaplatINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9973
10100