PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4751-4800 / 86044 show all
ckim-isaacINDELD6_15map_l125_m2_e1het
48.4211
32.3944
95.8333
94.8276
23482311
100.0000
ckim-isaacINDELD6_15map_l125_m2_e1hetalt
83.3333
75.0000
93.7500
82.6087
1551511
100.0000
ckim-isaacINDELD6_15map_l150_m0_e0*
39.0244
25.0000
88.8889
96.4567
824811
100.0000
ckim-isaacINDELD6_15map_l150_m0_e0het
25.0000
15.0000
75.0000
97.9695
317311
100.0000
ckim-isaacINDELD6_15map_l150_m1_e0*
54.9020
38.3562
96.5517
93.4389
28452811
100.0000
ckim-isaacINDELD6_15map_l150_m1_e0het
43.1373
28.2051
91.6667
96.4072
11281111
100.0000
ckim-isaacINDELD6_15map_l150_m2_e0*
53.0973
36.5854
96.7742
93.8247
30523011
100.0000
ckim-isaacINDELD6_15map_l150_m2_e0het
40.6780
26.0870
92.3077
96.5333
12341211
100.0000
ckim-isaacINDELD6_15map_l150_m2_e1*
52.9915
36.4706
96.8750
93.7864
31543111
100.0000
ckim-isaacINDELD6_15map_l150_m2_e1het
42.6230
27.6596
92.8571
96.3542
13341311
100.0000
ckim-isaacINDELD6_15map_l250_m1_e0*
48.0000
33.3333
85.7143
97.3485
612611
100.0000
ckim-isaacINDELD6_15map_l250_m1_e0het
40.0000
27.2727
75.0000
98.0952
38311
100.0000
ckim-isaacINDELD6_15map_l250_m2_e0*
41.3793
27.2727
85.7143
97.7346
616611
100.0000
ckim-isaacINDELD6_15map_l250_m2_e0het
33.3333
21.4286
75.0000
98.3607
311311
100.0000
ckim-isaacINDELD6_15map_l250_m2_e1*
41.3793
27.2727
85.7143
97.7848
616611
100.0000
ckim-isaacINDELD6_15map_l250_m2_e1het
33.3333
21.4286
75.0000
98.3806
311311
100.0000
ckim-isaacINDELD6_15map_sirenhetalt
74.2364
59.5960
98.4127
73.9669
59406211
100.0000
ckim-isaacINDELD6_15map_sirenhomalt
62.1053
45.3846
98.3333
70.5882
59715911
100.0000
ckim-isaacINDELD6_15segduphet
89.7285
86.9565
92.6829
92.5319
80127666
100.0000
ckim-isaacINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
64.6154
48.8372
95.4545
66.4122
42444222
100.0000
ckim-isaacINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
67.5729
51.2864
99.0164
50.3257
29928430233
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
68.7152
52.6555
98.8701
55.1331
34731235044
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
67.0732
55.5556
84.6154
78.3333
1081122
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
78.7919
68.5714
92.5926
64.4737
24112522
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
64.1449
48.2759
95.5556
76.5625
42454322
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
61.9048
48.1481
86.6667
86.6071
13141322
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
68.0484
51.8421
98.9950
48.4456
19718319722
100.0000
ckim-isaacINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
68.7152
52.6555
98.8701
55.1331
34731235044
100.0000
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
62.4562
45.8781
97.7941
50.0000
12815113333
100.0000
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
70.5909
54.8571
98.9796
54.4186
96799711
100.0000
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
77.9874
66.6667
93.9394
73.1707
30153122
100.0000
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
71.4286
62.5000
83.3333
72.7273
53511
100.0000
ckim-isaacINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
81.7248
70.3180
97.5490
56.0345
1998419955
100.0000
ckim-isaacINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
91.8736
85.1464
99.7549
69.6654
4077140711
100.0000
ckim-isaacINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
92.9012
86.9942
99.6689
73.6704
3014530111
100.0000
ckim-isaacINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
60.8000
46.3415
88.3721
66.6667
38443855
100.0000
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
73.9245
59.9078
96.5035
42.1053
1308713855
100.0000
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
96.2076
93.2907
99.3127
27.2500
2922128922
100.0000
ckim-isaacINDELI1_5map_l100_m0_e0hetalt
88.8889
88.8889
88.8889
91.7431
81811
100.0000
ckim-isaacINDELI1_5map_l100_m1_e0hetalt
83.4783
75.0000
94.1176
87.1698
33113222
100.0000
ckim-isaacINDELI1_5map_l100_m2_e0hetalt
83.4783
75.0000
94.1176
88.4354
33113222
100.0000
ckim-isaacINDELI1_5map_l100_m2_e1hetalt
83.9506
75.5556
94.4444
88.0795
34113422
100.0000
ckim-isaacINDELI1_5map_l125_m1_e0hetalt
90.9091
88.2353
93.7500
90.8571
1521511
100.0000
ckim-isaacINDELI1_5map_l125_m2_e0hetalt
88.8889
84.2105
94.1176
91.7476
1631611
100.0000
ckim-isaacINDELI1_5map_l125_m2_e1hetalt
88.8889
84.2105
94.1176
92.0188
1631611
100.0000
ckim-isaacINDELI1_5segduphomalt
97.0748
94.7146
99.5556
90.3516
4482544822
100.0000
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
80.9524
70.8333
94.4444
73.9130
1771711
100.0000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
63.0114
46.2366
98.8889
64.0000
861008911
100.0000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
70.8861
57.1429
93.3333
87.7049
20151411
100.0000
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
86.1870
79.6610
93.8776
52.8846
47124633
100.0000