PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 952 953 954 955 956 957 958 959 960 ... 1720 1721 » 47751-47800 / 86044 show all
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	84.4444	73.0769	100.0000	84.7328	19	7	20	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het	80.0000	66.6667	100.0000	95.4545	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	85.0000	73.9130	100.0000	77.7778	17	6	18	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	93.3333	87.5000	100.0000	68.4211	14	2	12	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	91.6667	84.6154	100.0000	71.1111	11	2	13	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	hetalt	66.6667	50.0000	100.0000	75.0000	1	1	1	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m0_e0	hetalt		0.0000		100.0000	0	1	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m0_e0	homalt	66.6667	50.0000	100.0000	88.8889	1	1	1	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m1_e0	hetalt		33.3333		100.0000	1	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m1_e0	homalt	75.0000	60.0000	100.0000	81.2500	3	2	3	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m2_e0	hetalt		33.3333		100.0000	1	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m2_e0	homalt	75.0000	60.0000	100.0000	86.9565	3	2	3	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m2_e1	hetalt		33.3333		100.0000	1	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l100_m2_e1	homalt	75.0000	60.0000	100.0000	86.9565	3	2	3	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m0_e0	hetalt		0.0000		100.0000	0	1	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m0_e0	homalt	66.6667	50.0000	100.0000	87.5000	1	1	1	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m1_e0	hetalt		33.3333		100.0000	1	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m1_e0	homalt	80.0000	66.6667	100.0000	84.6154	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m2_e0	hetalt		33.3333		100.0000	1	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m2_e0	homalt	80.0000	66.6667	100.0000	88.8889	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m2_e1	hetalt		33.3333		100.0000	1	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l125_m2_e1	homalt	80.0000	66.6667	100.0000	88.8889	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m0_e0	hetalt		0.0000		100.0000	0	1	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m0_e0	homalt	100.0000	100.0000	100.0000	87.5000	1	0	1	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m1_e0	hetalt		0.0000		100.0000	0	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m1_e0	homalt	80.0000	66.6667	100.0000	84.6154	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m2_e0	hetalt		0.0000		100.0000	0	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m2_e0	homalt	80.0000	66.6667	100.0000	87.5000	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m2_e1	hetalt		0.0000		100.0000	0	2	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l150_m2_e1	homalt	80.0000	66.6667	100.0000	87.5000	2	1	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l250_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l250_m1_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg2	INDEL	I16_PLUS	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l100_m2_e0	homalt	0.0000	0.0000	100.0000	92.5439	0	0	17	0	0
gduggal-bwavard	INDEL	C1_5	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l100_m2_e1	homalt	0.0000	0.0000	100.0000	92.7350	0	0	17	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m0_e0	homalt	0.0000	0.0000	100.0000	93.7500	0	0	6	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m1_e0	homalt	0.0000	0.0000	100.0000	95.1220	0	0	8	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m2_e0	homalt	0.0000	0.0000	100.0000	95.4286	0	0	8	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l125_m2_e1	homalt	0.0000	0.0000	100.0000	95.5556	0	0	8	0	0
gduggal-bwavard	INDEL	C1_5	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	C1_5	map_l150_m0_e0	homalt	0.0000	0.0000	100.0000	95.0617	0	0	4	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge