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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 90 91 92 93 94 95 96 97 98 ... 1720 1721 » 4651-4700 / 86044 show all
dgrover-gatk	INDEL	I16_PLUS	HG002complexvar	homalt	99.0385	100.0000	98.0952	70.7521	309	0	309	6	6	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	*	94.7743	93.0938	96.5167	53.0120	1995	148	1995	72	72	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	het	85.1501	95.7447	76.6667	93.8650	45	2	23	7	7	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	96.3626	93.0244	99.9492	46.0126	1947	146	1969	1	1	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002compoundhet	homalt	8.5714	100.0000	4.4776	74.3295	3	0	3	64	64	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.3738	95.1973	99.6522	66.4723	555	28	573	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	96.0630	100.0000	92.4242	87.5000	122	0	122	10	10	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.4450	95.2959	99.6933	71.1249	628	31	650	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.4132	89.6552	97.5000	85.2399	78	9	78	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	50.0000	100.0000	33.3333	95.2381	1	0	1	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	95.1520	92.7565	97.6744	76.4794	461	36	462	11	11	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	95.2384	92.4812	98.1651	88.0482	123	10	107	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.7596	92.3754	99.4012	59.5152	315	26	332	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	86.7925	100.0000	76.6667	89.0511	23	0	23	7	7	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	95.4319	93.2367	97.7330	74.4530	386	28	388	9	9	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	95.0290	92.4528	97.7528	87.1573	98	8	87	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.0450	93.0070	99.2883	56.0250	266	20	279	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	89.7959	100.0000	81.4815	87.8378	22	0	22	5	5	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.0678	92.8947	99.4652	64.2789	353	27	372	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.4450	95.2959	99.6933	71.1249	628	31	650	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	95.7511	92.4731	99.2701	67.4197	258	21	272	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	93.1818	100.0000	87.2340	88.3663	41	0	41	6	6	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	94.7122	93.6170	95.8333	81.2500	44	3	46	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	80.0000	100.0000	66.6667	90.1639	4	0	4	2	2	100.0000
dgrover-gatk	INDEL	I1_5	*	hetalt	97.2805	94.7387	99.9625	62.4322	10606	589	10669	4	4	100.0000
dgrover-gatk	INDEL	I1_5	HG002complexvar	hetalt	98.0896	96.4658	99.7691	70.7729	1665	61	1728	4	4	100.0000
dgrover-gatk	INDEL	I1_5	HG002compoundhet	hetalt	97.2852	94.7392	99.9718	57.2014	10589	588	10650	3	3	100.0000
dgrover-gatk	INDEL	I1_5	HG002compoundhet	homalt	73.8739	99.6960	58.6762	88.9153	328	1	328	231	231	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.5220	86.1761	99.8768	41.7921	773	124	811	1	1	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.5326	98.2332	92.9766	69.7368	278	5	278	21	21	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	63.1579	54.5455	75.0000	88.2353	6	5	12	4	4	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	83.7989	78.9474	89.2857	81.8182	15	4	25	3	3	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	80.9122	68.7259	98.3516	52.7273	178	81	179	3	3	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	91.1683	84.8517	98.5011	38.5122	801	143	920	14	14	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	89.9500	88.4615	91.4894	71.1656	46	6	43	4	4	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	59.5041	44.4444	90.0000	83.0508	4	5	9	1	1	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	76.7173	62.8571	98.4190	46.7368	220	130	249	4	4	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	75.3247	63.0435	93.5484	55.0725	29	17	29	2	2	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het	80.7692	87.5000	75.0000	75.0000	7	1	6	2	2	100.0000
ckim-isaac	INDEL	D16_PLUS	map_siren	homalt	20.5128	11.7647	80.0000	90.1961	4	30	4	1	1	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	81.5419	72.4638	93.2203	60.1351	50	19	55	4	4	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	94.0695	89.1473	99.5671	45.7746	230	28	230	1	1	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	87.1765	82.4324	92.5000	74.6032	61	13	74	6	6	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	89.1445	83.7838	95.2381	81.2500	31	6	40	2	2	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	76.2995	61.9145	99.3921	30.0000	304	187	327	2	2	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	54.0000	38.0282	93.1034	47.2727	27	44	27	2	2	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	95.1367	94.4039	95.8810	72.5157	388	23	419	18	18	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	97.2482	95.2381	99.3450	30.3951	440	22	455	3	3	100.0000
ckim-isaac	INDEL	D1_5	map_l100_m0_e0	hetalt	83.8983	78.5714	90.0000	92.5373	11	3	9	1	1	100.0000
ckim-isaac	INDEL	D1_5	map_l100_m1_e0	hetalt	77.8589	68.0851	90.9091	88.5813	32	15	30	3	3	100.0000

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