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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 89 90 91 92 93 94 95 96 97 ... 1720 1721 » 4601-4650 / 86044 show all
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8372	98.8372	98.8372	63.5593	255	3	255	3	3	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.2603	95.9459	98.6111	81.4433	71	3	71	1	1	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7250	99.6337	99.8165	77.9531	544	2	544	1	1	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	97.2973	97.2973	97.2973	87.8289	36	1	36	1	1	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	94.3538	99.2084	89.9522	60.9346	376	3	376	42	42	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	83.4621	71.8941	99.4667	29.5113	353	138	373	2	2	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	75.4098	97.1831	61.6071	52.3404	69	2	69	43	43	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.1559	97.0803	99.2556	71.3982	399	12	400	3	3	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9362	99.9607	99.9116	54.3466	10174	4	10174	9	9	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.1916	98.5934	99.7970	32.9401	1472	21	1475	3	3	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9319	100.0000	99.8638	51.2807	3666	0	3666	5	5	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.4924	99.4924	99.4924	60.6000	196	1	196	1	1	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6750	99.5671	99.7831	29.8326	460	2	460	1	1	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	58.3333	13	0	13	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l100_m0_e0	homalt	99.0291	98.8372	99.2218	84.4337	255	3	255	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l100_m1_e0	homalt	99.4073	99.1554	99.6604	83.4225	587	5	587	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.4258	99.1817	99.6711	84.0629	606	5	606	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l100_m2_e1	homalt	99.4341	99.1935	99.6759	84.1347	615	5	615	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l125_m0_e0	homalt	98.3051	97.9730	98.6395	87.7704	145	3	145	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l125_m1_e0	homalt	99.1379	98.8539	99.4236	85.6730	345	4	345	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l125_m2_e0	homalt	99.1736	98.9011	99.4475	86.3961	360	4	360	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	99.1914	98.9247	99.4595	86.3921	368	4	368	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.8795	83	2	83	1	1	100.0000
dgrover-gatk	INDEL	D1_5	map_l150_m1_e0	homalt	98.8962	98.2456	99.5556	87.8837	224	4	224	1	1	100.0000
dgrover-gatk	INDEL	D1_5	map_l150_m2_e0	homalt	98.9605	98.3471	99.5816	88.5151	238	4	238	1	1	100.0000
dgrover-gatk	INDEL	D1_5	map_l150_m2_e1	homalt	98.7854	98.3871	99.1870	88.4507	244	4	244	2	2	100.0000
dgrover-gatk	INDEL	D1_5	map_siren	homalt	99.5720	99.4863	99.6578	81.5178	1162	6	1165	4	4	100.0000
dgrover-gatk	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5665	359	0	359	2	2	100.0000
dgrover-gatk	INDEL	D6_15	HG002complexvar	homalt	99.4048	100.0000	98.8166	62.8338	1169	0	1169	14	14	100.0000
dgrover-gatk	INDEL	D6_15	HG002compoundhet	homalt	26.9663	100.0000	15.5844	70.3846	24	0	24	130	130	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.8894	43	0	43	1	1	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.7394	99.6528	99.8261	69.1854	574	2	574	1	1	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	96.3131	94.5455	98.1481	61.9718	52	3	53	1	1	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	67.2263	487	0	487	1	1	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	93.7973	90.9091	96.8750	61.9048	30	3	31	1	1	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	92.7350	99.3135	86.9739	48.2902	434	3	434	65	65	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.7832	99.8930	95.7607	54.8681	2801	3	2801	124	124	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.7706	100.0000	97.5710	56.3208	2370	0	2370	59	59	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.3863	99.8976	96.9200	41.5335	1951	2	1951	62	62	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	88.2389	79.1284	99.7203	27.1152	690	182	713	2	2	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	83.4646	98.7578	72.2727	35.4839	159	2	159	61	61	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.2973	97.2973	97.2973	62.6263	36	1	36	1	1	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.9371	98.3926	99.4876	28.3354	1163	19	1165	6	6	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7650	99.8824	99.6479	51.0626	849	1	849	3	3	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.7975	99.7110	99.8843	36.2126	1725	5	1726	2	2	100.0000
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7748	100.0000	99.5506	34.4624	443	0	443	2	2	100.0000
dgrover-gatk	INDEL	D6_15	segdup	homalt	96.1538	100.0000	92.5926	92.4051	50	0	50	4	4	100.0000
dgrover-gatk	INDEL	I16_PLUS	*	hetalt	96.2521	92.9933	99.7475	58.1926	1951	147	1975	5	5	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002complexvar	*	98.9256	98.4721	99.3832	67.6397	1289	20	1289	8	8	100.0000
dgrover-gatk	INDEL	I16_PLUS	HG002complexvar	hetalt	97.8993	96.4179	99.4269	69.1424	323	12	347	2	2	100.0000

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