PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
45901-45950 / 86044 show all
ltrigg-rtg1INDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
96.9880
901000
ltrigg-rtg1INDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.7456
1001100
ltrigg-rtg1INDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7532
901000
ltrigg-rtg1INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8235
20200
ltrigg-rtg1INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0385
20200
ltrigg-rtg1INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0521
20200
ltrigg-rtg1INDELI1_5segduphetalt
98.9474
97.9167
100.0000
96.6403
4715100
ltrigg-rtg1INDELI1_5segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
53.1915
2202200
ltrigg-rtg1INDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
ltrigg-rtg1INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg1INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg1INDELI6_15decoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15decoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15func_cds*
98.8235
97.6744
100.0000
31.1475
4214200
ltrigg-rtg1INDELI6_15func_cdshet
100.0000
100.0000
100.0000
32.3529
2402300
ltrigg-rtg1INDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
42.8571
31400
ltrigg-rtg1INDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
25.0000
1501500
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.9825
86.8852
100.0000
58.9147
5385300
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.8866
3603600
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.3415
92.9412
100.0000
63.4361
7968300
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
61.7886
9209400
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
98.7448
97.5207
100.0000
64.0180
236624000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.1736
98.3607
100.0000
64.1566
120211900
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
65.1007
4845200
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.9032
6806900
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
71.4286
55.5556
100.0000
89.7959
54500
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
96.6667
93.5484
100.0000
82.3171
5845800
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.6744
95.4545
100.0000
76.7956
4224200
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8429
20200
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000