PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
45851-45900 / 86044 show all
ltrigg-rtg1INDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
55.5556
40400
ltrigg-rtg1INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg1INDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg1INDELI1_5decoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5decoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5func_cds*
100.0000
100.0000
100.0000
25.9259
180018000
ltrigg-rtg1INDELI1_5func_cdshet
100.0000
100.0000
100.0000
21.3333
5905900
ltrigg-rtg1INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg1INDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
25.6250
119011900
ltrigg-rtg1INDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
98.3842
96.8198
100.0000
64.1060
274927100
ltrigg-rtg1INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8995
10100
ltrigg-rtg1INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.6486
10100
ltrigg-rtg1INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.2963
92.8571
100.0000
67.2000
7868200
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.4772
97.0000
100.0000
59.4937
194619200
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8980
10100
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.5915
10100
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.6425
97.3214
100.0000
83.1933
109312000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.3684
98.7448
100.0000
70.7210
472646700
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.3051
96.6667
100.0000
88.0357
5826700
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.5646
99.1329
100.0000
74.3783
343334000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
98.1366
96.3415
100.0000
67.5000
7937800
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
82.6087
70.3704
100.0000
76.4045
1982100
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7411
99.4835
100.0000
59.6808
963596000
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9940
10100
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9905
10100
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
96.9231
10200
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.0233
86.9565
100.0000
41.6667
2032100
ltrigg-rtg1INDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.2222
40500
ltrigg-rtg1INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
95.2381
1701900
ltrigg-rtg1INDELI1_5map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
95.5157
1812000
ltrigg-rtg1INDELI1_5map_l125_m2_e1hetalt
97.2973
94.7368
100.0000
95.5556
1812000
ltrigg-rtg1INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.1831
30400
ltrigg-rtg1INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.5398
901000