PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
45601-45650 / 86044 show all
jmaeng-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jmaeng-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jmaeng-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jmaeng-gatkINDEL*lowcmp_SimpleRepeat_triTR_51to200hetalt
96.6942
93.6000
100.0000
27.1605
117811800
jmaeng-gatkINDEL*map_l100_m0_e0hetalt
91.8033
84.8485
100.0000
91.6427
2852900
jmaeng-gatkINDEL*map_l100_m1_e0hetalt
93.1034
87.0968
100.0000
87.1915
1081610900
jmaeng-gatkINDEL*map_l100_m2_e0hetalt
92.7039
86.4000
100.0000
88.0952
1081711000
jmaeng-gatkINDEL*map_l100_m2_e1hetalt
92.2449
85.6061
100.0000
87.9328
1131911500
jmaeng-gatkINDEL*map_l125_m0_e0hetalt
95.2381
90.9091
100.0000
95.7082
1011000
jmaeng-gatkINDEL*map_l125_m1_e0hetalt
93.3333
87.5000
100.0000
93.2692
3553500
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.4545
91.3043
100.0000
69.3396
6366500
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8235
97.6744
100.0000
58.1549
252625400
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.0868
1001000
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.9614
70700
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2456
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.4505
20200
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.4475
98.9011
100.0000
72.3149
540653100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7283
99.4580
100.0000
77.2087
367235600
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.2973
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.6667
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9981
10200
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9876
10200
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.9248
99.8496
100.0000
34.3750
13282132300
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
97.2603
94.6667
100.0000
64.9038
7147300
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
96.0000
92.3077
100.0000
88.7097
1211400
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
96.8421
93.8776
100.0000
24.5902
4634600
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
43.4783
1301300
ltrigg-rtg1INDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
95.6522
1221100
ltrigg-rtg1INDELD1_5map_l100_m1_e0hetalt
89.4118
80.8511
100.0000
93.5201
3893700
ltrigg-rtg1INDELD1_5map_l100_m2_e0hetalt
89.6552
81.2500
100.0000
93.6982
3993800
ltrigg-rtg1INDELD1_5map_l100_m2_e1hetalt
90.3226
82.3529
100.0000
93.2039
4294200
ltrigg-rtg1INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.3516
30300
ltrigg-rtg1INDELD1_5map_l125_m1_e0hetalt
91.6667
84.6154
100.0000
97.1671
1121000
ltrigg-rtg1INDELD1_5map_l125_m2_e0hetalt
88.8889
80.0000
100.0000
97.1503
1231100
ltrigg-rtg1INDELD1_5map_l125_m2_e1hetalt
88.8889
80.0000
100.0000
97.2010
1231100
ltrigg-rtg1INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.6207
20200
ltrigg-rtg1INDELD1_5map_l150_m1_e0hetalt
83.3333
71.4286
100.0000
98.5765
52400
ltrigg-rtg1INDELD1_5map_l150_m2_e0hetalt
83.3333
71.4286
100.0000
98.6971
52400
ltrigg-rtg1INDELD1_5map_l150_m2_e1hetalt
85.7143
75.0000
100.0000
98.4076
62500
ltrigg-rtg1INDELD1_5map_l250_m0_e0*
94.2529
89.1304
100.0000
95.2596
4154200
ltrigg-rtg1INDELD1_5map_l250_m0_e0het
91.8033
84.8485
100.0000
92.3483
2852900
ltrigg-rtg1INDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.9194
1301300
ltrigg-rtg1INDELD1_5map_l250_m1_e0*
95.4128
91.2281
100.0000
91.6132
1561515700
ltrigg-rtg1INDELD1_5map_l250_m1_e0het
92.7536
86.4865
100.0000
88.6179
96159800