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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 80 81 82 83 84 85 86 87 88 ... 1720 1721 » 4151-4200 / 86044 show all
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	92.3833	99.2084	86.4368	60.3102	376	3	376	59	59	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.3117	93.2057	99.6319	25.1721	7545	550	7579	28	28	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.9389	94.3899	99.6295	24.2810	6444	383	6453	24	24	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	96.8780	94.3944	99.4959	25.6896	6500	386	6513	33	33	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	78.9725	65.3768	99.7076	29.3388	321	170	341	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	69.6970	97.1831	54.3307	50.1961	69	2	69	58	58	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.0305	96.8370	99.2537	71.0999	398	13	399	3	3	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9362	99.9607	99.9116	54.3220	10174	4	10174	9	9	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.0215	98.2585	99.7963	32.1198	1467	26	1470	3	3	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8910	99.9727	99.8094	51.1312	3665	1	3665	7	7	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	60.2410	196	1	196	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6750	99.5671	99.7831	28.3048	460	2	460	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	58.3333	13	0	13	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l100_m0_e0	homalt	99.4197	99.6124	99.2278	83.8529	257	1	257	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l100_m1_e0	homalt	99.5773	99.4932	99.6616	83.0562	589	3	589	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l100_m2_e0	homalt	99.5905	99.5090	99.6721	83.7116	608	3	608	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l100_m2_e1	homalt	99.5964	99.5161	99.6769	83.7873	617	3	617	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m0_e0	homalt	98.9899	99.3243	98.6577	87.1330	147	1	147	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m1_e0	homalt	99.4269	99.4269	99.4269	85.2494	347	2	347	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e0	homalt	99.4505	99.4505	99.4505	86.0108	362	2	362	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e1	homalt	99.4624	99.4624	99.4624	86.0098	370	2	370	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m0_e0	homalt	99.4152	100.0000	98.8372	90.2935	85	0	85	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m1_e0	homalt	99.3407	99.1228	99.5595	87.4377	226	2	226	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e0	homalt	99.3789	99.1736	99.5851	88.1105	240	2	240	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e1	homalt	99.1935	99.1935	99.1935	88.0424	246	2	246	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_siren	homalt	99.6580	99.6575	99.6584	81.1615	1164	4	1167	4	4	100.0000
bgallagher-sentieon	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.4986	359	0	359	2	2	100.0000
bgallagher-sentieon	INDEL	D6_15	HG002complexvar	hetalt	94.0808	91.9052	96.3618	47.7926	931	82	980	37	37	100.0000
bgallagher-sentieon	INDEL	D6_15	HG002compoundhet	hetalt	96.6337	93.8535	99.5837	23.7576	7650	501	7654	32	32	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.5221	95.5960	99.5274	32.5866	6512	300	6529	31	31	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.7778	43	0	43	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.7394	99.6528	99.8261	68.9860	574	2	574	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	96.3131	94.5455	98.1481	61.7021	52	3	53	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	67.0715	487	0	487	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	93.7973	90.9091	96.8750	61.4458	30	3	31	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	91.0808	99.3135	84.1085	47.7204	434	3	434	82	82	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.4185	93.4618	99.5685	26.7894	6647	465	6691	29	29	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.5129	95.5131	99.5982	26.1932	5194	244	5206	21	21	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.1938	95.0545	99.4316	25.2614	4536	236	4548	26	26	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	85.6059	75.0000	99.7054	26.4355	654	218	677	2	2	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	79.1045	98.7578	65.9751	35.3887	159	2	159	82	82	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.2973	97.2973	97.2973	60.6383	36	1	36	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.8510	98.2234	99.4867	27.7056	1161	21	1163	6	6	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.6479	99.8824	99.4145	51.1721	849	1	849	5	5	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.7686	99.6532	99.8842	35.8231	1724	6	1725	2	2	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7748	100.0000	99.5506	34.7507	443	0	443	2	2	100.0000
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	0.0000	0.0000	25.0000	66.6667	0	0	1	3	3	100.0000
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	*	12.7389	8.0000	31.2500	63.6364	2	23	5	11	11	100.0000
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	0.0000	0.0000	41.6667	69.2308	0	2	5	7	7	100.0000
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	20.0000	0	0	0	4	4	100.0000

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