PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
41101-41150 / 86044 show all | |||||||||||||||
| ndellapenna-hhga | INDEL | D6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 53.3333 | 44.4444 | 66.6667 | 98.8235 | 4 | 5 | 4 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 69.2731 | 53.6082 | 97.8723 | 31.8841 | 52 | 45 | 46 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l100_m0_e0 | het | 94.9442 | 98.3333 | 91.7808 | 88.6997 | 59 | 1 | 67 | 6 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l100_m0_e0 | hetalt | 71.5596 | 68.4211 | 75.0000 | 82.8571 | 13 | 6 | 9 | 3 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l125_m0_e0 | het | 95.3191 | 96.5517 | 94.1176 | 92.2018 | 28 | 1 | 32 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l125_m2_e1 | hetalt | 71.1864 | 60.0000 | 87.5000 | 90.3614 | 12 | 8 | 7 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l150_m0_e0 | het | 95.4148 | 95.0000 | 95.8333 | 93.3148 | 19 | 1 | 23 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m0_e0 | * | 92.3077 | 100.0000 | 85.7143 | 97.4910 | 6 | 0 | 6 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m0_e0 | het | 88.8889 | 100.0000 | 80.0000 | 97.2678 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m1_e0 | * | 94.4444 | 94.4444 | 94.4444 | 96.3190 | 17 | 1 | 17 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m1_e0 | het | 95.6522 | 100.0000 | 91.6667 | 96.3636 | 11 | 0 | 11 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m2_e0 | * | 95.4545 | 95.4545 | 95.4545 | 96.1131 | 21 | 1 | 21 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m2_e0 | het | 96.5517 | 100.0000 | 93.3333 | 96.0317 | 14 | 0 | 14 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m2_e1 | * | 95.4545 | 95.4545 | 95.4545 | 96.2069 | 21 | 1 | 21 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | D6_15 | map_l250_m2_e1 | het | 96.5517 | 100.0000 | 93.3333 | 96.1340 | 14 | 0 | 14 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | * | 96.5517 | 94.3820 | 98.8235 | 71.3805 | 84 | 5 | 84 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 96.9697 | 100.0000 | 94.1176 | 78.4810 | 16 | 0 | 16 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | * | 0.0000 | 25.0000 | 0.0000 | 96.1538 | 1 | 3 | 0 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 0.0000 | 75.0000 | 0 | 2 | 0 | 1 | 0 | 0.0000 | ||
| ndellapenna-hhga | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | * | 71.3073 | 57.6923 | 93.3333 | 91.8919 | 15 | 11 | 14 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | het | 0.0000 | 33.3333 | 0.0000 | 99.1228 | 1 | 2 | 0 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l100_m0_e0 | * | 81.8182 | 81.8182 | 81.8182 | 86.7470 | 9 | 2 | 9 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l100_m0_e0 | het | 87.5000 | 87.5000 | 87.5000 | 86.2069 | 7 | 1 | 7 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 50.0000 | 50.0000 | 50.0000 | 89.4737 | 1 | 1 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 50.0000 | 40.0000 | 66.6667 | 94.3396 | 2 | 3 | 2 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l100_m2_e0 | homalt | 50.0000 | 40.0000 | 66.6667 | 95.6522 | 2 | 3 | 2 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l100_m2_e1 | homalt | 50.0000 | 40.0000 | 66.6667 | 95.6522 | 2 | 3 | 2 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l125_m0_e0 | * | 72.7273 | 66.6667 | 80.0000 | 91.2281 | 4 | 2 | 4 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l125_m0_e0 | het | 66.6667 | 66.6667 | 66.6667 | 92.3077 | 2 | 1 | 2 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l150_m0_e0 | * | 88.8889 | 100.0000 | 80.0000 | 88.3721 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l150_m0_e0 | het | 80.0000 | 100.0000 | 66.6667 | 88.8889 | 2 | 0 | 2 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m0_e0 | * | 0.0000 | 0.0000 | 95.0000 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m0_e0 | het | 0.0000 | 0.0000 | 90.9091 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m1_e0 | * | 66.6667 | 100.0000 | 50.0000 | 95.5556 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m1_e0 | het | 66.6667 | 100.0000 | 50.0000 | 93.5484 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m2_e0 | * | 66.6667 | 100.0000 | 50.0000 | 96.0784 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m2_e0 | het | 66.6667 | 100.0000 | 50.0000 | 94.2857 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m2_e1 | * | 66.6667 | 100.0000 | 50.0000 | 96.1538 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I16_PLUS | map_l250_m2_e1 | het | 66.6667 | 100.0000 | 50.0000 | 94.4444 | 1 | 0 | 1 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | func_cds | * | 99.4475 | 100.0000 | 98.9011 | 31.8352 | 180 | 0 | 180 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | func_cds | het | 98.3333 | 100.0000 | 96.7213 | 35.1064 | 59 | 0 | 59 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | * | 89.6217 | 88.0000 | 91.3043 | 42.5000 | 22 | 3 | 21 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | het | 50.0000 | 100.0000 | 33.3333 | 78.5714 | 2 | 0 | 1 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l100_m0_e0 | het | 98.4568 | 97.8528 | 99.0683 | 85.7648 | 319 | 7 | 319 | 3 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l100_m1_e0 | het | 98.5107 | 97.9408 | 99.0874 | 83.2679 | 761 | 16 | 760 | 7 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l100_m2_e0 | het | 98.5410 | 97.9823 | 99.1060 | 84.5073 | 777 | 16 | 776 | 7 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l100_m2_e1 | het | 98.3825 | 97.6543 | 99.1217 | 84.6554 | 791 | 19 | 790 | 7 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l100_m2_e1 | hetalt | 97.7778 | 97.7778 | 97.7778 | 90.5858 | 44 | 1 | 44 | 1 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l125_m0_e0 | het | 98.1627 | 97.3958 | 98.9418 | 89.2062 | 187 | 5 | 187 | 2 | 0 | 0.0000 | |
| ndellapenna-hhga | INDEL | I1_5 | map_l125_m1_e0 | het | 98.4488 | 97.9424 | 98.9605 | 85.8903 | 476 | 10 | 476 | 5 | 0 | 0.0000 | |