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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 504 505 506 507 508 509 510 511 512 ... 1720 1721 » 25351-25400 / 86044 show all
ckim-vqsr	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	90.5425	92.0000	89.1304	86.2687	46	4	41	5	2	40.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.5099	97.8184	99.2114	76.2576	1928	43	1887	15	6	40.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.5099	97.8184	99.2114	76.2576	1928	43	1887	15	6	40.0000
ckim-vqsr	SNP	tv	HG002complexvar	het	98.9859	98.0150	99.9763	22.4456	147739	2992	147662	35	14	40.0000
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	90.5425	92.0000	89.1304	86.4706	46	4	41	5	2	40.0000
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1693	98.6207	97.7221	69.8074	429	6	429	10	4	40.0000
dgrover-gatk	INDEL	D1_5	segdup	*	99.5471	99.5467	99.5475	94.9619	1098	5	1100	5	2	40.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	95.8025	94.1748	97.4874	88.3830	194	12	194	5	2	40.0000
egarrison-hhga	INDEL	D16_PLUS	map_l100_m0_e0	*	82.4496	82.1429	82.7586	90.9375	23	5	24	5	2	40.0000
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	98.1870	98.6301	97.7477	76.6562	648	9	651	15	6	40.0000
egarrison-hhga	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	78.1818	75.4386	81.1321	99.3693	43	14	43	10	4	40.0000
egarrison-hhga	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	81.0127	76.1905	86.4865	99.3583	32	10	32	5	2	40.0000
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	97.3948	97.3583	97.4313	62.8424	3796	103	3793	100	40	40.0000
egarrison-hhga	INDEL	I1_5	map_l100_m1_e0	homalt	99.1321	99.2278	99.0366	81.5237	514	4	514	5	2	40.0000
egarrison-hhga	INDEL	I1_5	map_l100_m2_e0	homalt	99.1533	99.2467	99.0602	83.0249	527	4	527	5	2	40.0000
egarrison-hhga	INDEL	I1_5	map_l100_m2_e1	homalt	99.1674	99.2593	99.0758	83.1779	536	4	536	5	2	40.0000
hfeng-pmm1	SNP	ti	map_l150_m1_e0	homalt	99.7748	99.7543	99.7952	71.0227	7309	18	7309	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l150_m2_e0	homalt	99.7833	99.7637	99.8030	73.2106	7598	18	7598	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l150_m2_e1	homalt	99.7855	99.7660	99.8049	73.2531	7675	18	7675	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l250_m0_e0	homalt	99.0847	99.3119	98.8584	92.1786	433	3	433	5	2	40.0000
hfeng-pmm3	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.6122	99.3198	99.9063	37.9962	10659	73	10659	10	4	40.0000
hfeng-pmm3	SNP	ti	map_l100_m0_e0	homalt	99.7684	99.7299	99.8069	62.9000	7753	21	7753	15	6	40.0000
hfeng-pmm3	SNP	ti	map_l150_m1_e0	homalt	99.7816	99.7680	99.7952	70.9268	7310	17	7310	15	6	40.0000
hfeng-pmm3	SNP	ti	map_l150_m2_e0	homalt	99.7899	99.7768	99.8030	73.1277	7599	17	7599	15	6	40.0000
hfeng-pmm3	SNP	ti	map_l150_m2_e1	homalt	99.7920	99.7790	99.8050	73.1684	7676	17	7676	15	6	40.0000
hfeng-pmm3	SNP	ti	map_l250_m0_e0	homalt	99.0847	99.3119	98.8584	92.1463	433	3	433	5	2	40.0000
hfeng-pmm2	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6231	99.4357	99.8113	69.4243	2643	15	2645	5	2	40.0000
hfeng-pmm2	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.8403	99.7607	99.9201	44.1798	6253	15	6253	5	2	40.0000
hfeng-pmm2	SNP	ti	map_l125_m0_e0	homalt	99.6883	99.7105	99.6661	69.9826	4478	13	4478	15	6	40.0000
hfeng-pmm2	SNP	ti	map_l250_m0_e0	homalt	99.0847	99.3119	98.8584	92.1786	433	3	433	5	2	40.0000
hfeng-pmm3	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.2169	98.7151	99.7238	50.1102	3611	47	3611	10	4	40.0000
hfeng-pmm3	INDEL	*	map_l100_m2_e0	homalt	99.2469	99.2863	99.2076	82.1525	1252	9	1252	10	4	40.0000
hfeng-pmm3	INDEL	*	map_l100_m2_e1	homalt	99.2587	99.2974	99.2200	82.2364	1272	9	1272	10	4	40.0000
hfeng-pmm3	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	98.3153	96.9789	99.6891	57.4040	1605	50	1603	5	2	40.0000
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.2356	91.2621	97.4093	87.4594	188	18	188	5	2	40.0000
hfeng-pmm3	INDEL	I1_5	map_l125_m0_e0	*	98.5533	98.7097	98.3974	87.4598	306	4	307	5	2	40.0000
jlack-gatk	INDEL	D16_PLUS	map_l100_m1_e0	homalt	78.7879	86.6667	72.2222	94.9861	13	2	13	5	2	40.0000
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e0	homalt	80.0000	87.5000	73.6842	95.5916	14	2	14	5	2	40.0000
jlack-gatk	INDEL	D16_PLUS	map_l100_m2_e1	homalt	80.0000	87.5000	73.6842	95.6221	14	2	14	5	2	40.0000
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5296	99.5296	99.5296	81.1592	1058	5	1058	5	2	40.0000
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5374	99.6524	99.4226	63.8866	860	3	861	5	2	40.0000
jlack-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	97.3116	97.6190	97.0060	78.0552	164	4	162	5	2	40.0000
hfeng-pmm1	INDEL	I1_5	map_l100_m1_e0	*	98.7628	98.2823	99.2481	82.0270	1316	23	1320	10	4	40.0000
hfeng-pmm1	INDEL	I1_5	map_l100_m2_e0	*	98.7520	98.2456	99.2636	83.3619	1344	24	1348	10	4	40.0000
hfeng-pmm1	INDEL	I1_5	map_l100_m2_e1	*	98.7398	98.2079	99.2775	83.4529	1370	25	1374	10	4	40.0000
hfeng-pmm1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	94.5883	90.0626	99.5930	87.0976	2447	270	2447	10	4	40.0000
hfeng-pmm1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	91.8622	85.4308	99.3408	88.0041	1507	257	1507	10	4	40.0000
hfeng-pmm1	SNP	*	map_l125_m1_e0	homalt	99.8048	99.7870	99.8225	66.5790	16869	36	16869	30	12	40.0000
hfeng-pmm1	SNP	*	map_l125_m2_e0	homalt	99.8100	99.7928	99.8273	69.0265	17339	36	17339	30	12	40.0000
hfeng-pmm1	SNP	*	map_l125_m2_e1	homalt	99.8117	99.7947	99.8288	69.0610	17496	36	17496	30	12	40.0000

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