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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
2401-2450 / 86044 show all
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.6106
92.2747
99.1968
83.5535
2151824722
100.0000
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.2800
98.7275
99.8388
67.9580
186224185833
100.0000
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.5568
93.9394
99.3243
87.0289
124814711
100.0000
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.8091
85.5307
99.0822
46.3398
232939423752222
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_diTR_51to200hetalt
84.9703
74.2812
99.2529
37.7409
93032293077
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_diTR_51to200homalt
91.1548
86.0724
96.8750
44.7323
309503101010
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.1229
95.5140
98.7868
83.6312
5112457077
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7960
99.6105
99.9822
54.2557
11252441122022
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
88.4082
79.8387
99.0385
99.9179
992510311
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
83.3333
75.0000
93.7500
99.9211
1241511
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
97.6327
95.7867
99.5512
56.7594
256911326621212
100.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_triTR_11to50hetalt
98.9130
98.1582
99.6795
48.5714
9061793333
100.0000
ltrigg-rtg1INDEL*map_l100_m0_e0hetalt
90.4198
84.8485
96.7742
93.9216
2853011
100.0000
ltrigg-rtg1INDEL*map_l100_m1_e0hetalt
91.3043
84.6774
99.0566
91.1148
1051910511
100.0000
ltrigg-rtg1INDEL*map_l100_m2_e0hetalt
91.3793
84.8000
99.0654
91.6341
1061910611
100.0000
ltrigg-rtg1INDEL*map_l100_m2_e1hetalt
90.9869
84.0909
99.1150
91.3476
1112111211
100.0000
ltrigg-rtg1INDEL*map_l150_m0_e0homalt
99.0881
99.3902
98.7879
89.8148
163116322
100.0000
ltrigg-rtg1INDEL*map_sirenhetalt
94.0758
89.8785
98.6842
91.0728
2222522533
100.0000
ltrigg-rtg1INDEL*segduphomalt
99.6351
99.5833
99.6868
92.9210
956495533
100.0000
ltrigg-rtg1INDELC16_PLUS*hetalt
0.0000
0.0000
96.5517
94.6593
002811
100.0000
ltrigg-rtg1INDELC16_PLUS*homalt
0.0000
0.0000
94.7368
95.5504
001811
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvar*
0.0000
0.0000
95.5224
89.8792
006433
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvarhet
0.0000
0.0000
95.4545
90.4762
002111
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
96.2963
87.6147
002611
100.0000
ltrigg-rtg1INDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
94.4444
91.5493
001711
100.0000
ltrigg-rtg1INDELC16_PLUSHG002compoundhet*
0.0000
0.0000
87.5000
88.7324
002844
100.0000
ltrigg-rtg1INDELC16_PLUSHG002compoundhethet
0.0000
0.0000
60.0000
90.3846
00322
100.0000
ltrigg-rtg1INDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
96.1538
88.0184
002511
100.0000
ltrigg-rtg1INDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
93.3333
00011
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
75.0000
97.5758
00311
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
93.7500
95.8170
003022
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
91.6667
95.6204
001111
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
92.3077
95.7096
001211
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
93.3333
96.2312
001411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
80.0000
97.9757
00411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
97.2222
00211
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
92.5926
95.5150
002522
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
0.0000
0.0000
87.5000
95.7895
00711
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
95.3125
001111
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
95.4545
93.9891
002111
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
85.7143
93.8053
00611
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
95.7447
001111
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
93.3333
96.2312
001411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
94.1176
95.7393
001611
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
88.8889
94.6746
00811
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
88.8889
94.6746
00811
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
75.0000
94.0299
00311
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
80.0000
95.1923
00411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
50.0000
95.3488
00111
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l100_m1_e0*
0.0000
0.0000
96.7742
00011
100.0000