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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
23701-23750 / 86044 show all
raldana-dualsentieonSNPtimap_l250_m0_e0homalt
98.9619
98.3945
99.5360
89.7625
429742921
50.0000
raldana-dualsentieonSNPtimap_l250_m1_e0homalt
99.4375
99.0044
99.8745
84.1493
159116159121
50.0000
raldana-dualsentieonSNPtimap_l250_m2_e0homalt
99.4834
99.0852
99.8847
85.3537
173316173321
50.0000
raldana-dualsentieonSNPtimap_l250_m2_e1homalt
99.4901
99.0971
99.8862
85.3999
175616175621
50.0000
raldana-dualsentieonSNPtvHG002compoundhethet
94.2957
89.3216
99.8564
53.2191
4174499417263
50.0000
raldana-dualsentieonSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.6183
99.6183
99.6183
63.0465
522252221
50.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
86.9955
78.2258
97.9798
90.3131
97279721
50.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.7326
99.5995
99.8661
79.1457
14926149221
50.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_homopolymer_6to10het
99.7358
99.5014
99.9714
60.2855
698435698121
50.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_51to200*
79.4521
69.0476
93.5484
90.6627
29132921
50.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
85.7143
100.0000
75.0000
91.1111
60621
50.0000
raldana-dualsentieonSNPtvmap_l100_m0_e0homalt
99.7265
99.5580
99.8956
59.9142
382917382942
50.0000
raldana-dualsentieonSNPtvmap_l100_m1_e0homalt
99.8450
99.7567
99.9335
58.3702
902122902163
50.0000
raldana-dualsentieonSNPtvmap_l100_m2_e0homalt
99.8479
99.7612
99.9348
60.9327
919222919263
50.0000
raldana-dualsentieonSNPtvmap_l100_m2_e1homalt
99.8494
99.7635
99.9354
60.9109
928022928063
50.0000
raldana-dualsentieonSNPtvmap_l125_m0_e0homalt
99.6165
99.4147
99.8192
66.9456
220813220842
50.0000
raldana-dualsentieonSNPtvmap_l125_m1_e0homalt
99.7865
99.6758
99.8974
63.2172
584119584163
50.0000
raldana-dualsentieonSNPtvmap_l125_m2_e0homalt
99.7837
99.6676
99.9000
65.8746
599720599763
50.0000
raldana-dualsentieonSNPtvmap_l125_m2_e1homalt
99.7857
99.6707
99.9010
65.8803
605420605463
50.0000
raldana-dualsentieonSNPtvmap_l150_m1_e0homalt
99.7335
99.5692
99.8983
67.6642
392917392942
50.0000
raldana-dualsentieonSNPtvmap_l150_m2_e0homalt
99.7424
99.5836
99.9017
70.2246
406617406642
50.0000
raldana-dualsentieonSNPtvmap_l150_m2_e1homalt
99.7335
99.5646
99.9029
70.1838
411618411642
50.0000
raldana-dualsentieonSNPtvmap_l250_m1_e0homalt
99.4740
99.4159
99.5322
84.0366
851585142
50.0000
raldana-dualsentieonSNPtvmap_l250_m2_e0homalt
99.4658
99.3597
99.5722
85.2640
931693142
50.0000
raldana-dualsentieonSNPtvmap_l250_m2_e1homalt
99.4709
99.3658
99.5763
85.3530
940694042
50.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.2269
98.6744
99.7855
71.4089
186125186142
50.0000
rpoplin-dv42INDEL*map_l150_m2_e1*
97.8375
97.3593
98.3205
99.0326
14013814052412
50.0000
rpoplin-dv42INDEL*map_l250_m1_e0*
96.0396
95.4098
96.6777
99.6478
29114291105
50.0000
rpoplin-dv42INDEL*map_l250_m1_e0het
95.4667
94.2105
96.7568
95.6957
1791117963
50.0000
rpoplin-dv42INDEL*map_l250_m2_e0*
96.3526
95.7704
96.9419
99.6591
31714317105
50.0000
rpoplin-dv42INDEL*map_l250_m2_e0het
95.9036
94.7619
97.0732
95.8061
1991119963
50.0000
rpoplin-dv42INDEL*map_l250_m2_e1*
96.3746
95.7958
96.9605
99.6645
31914319105
50.0000
rpoplin-dv42INDEL*map_l250_m2_e1het
95.9233
94.7867
97.0874
95.8874
2001120063
50.0000
raldana-dualsentieonINDELD16_PLUSsegdup*
94.0171
94.8276
93.2203
95.0545
5535542
50.0000
raldana-dualsentieonINDELD16_PLUSsegduphet
93.2216
97.2973
89.4737
95.2736
3613442
50.0000
raldana-dualsentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.2916
98.8069
99.7809
75.8402
9111191121
50.0000
raldana-dualsentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
99.7252
99.5058
99.9456
54.0983
14697731469884
50.0000
raldana-dualsentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7333
100.0000
99.4681
59.3514
374037421
50.0000
raldana-dualsentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7093
100.0000
99.4203
57.3020
343034321
50.0000
raldana-dualsentieonINDELD6_15map_sirenhomalt
98.8506
99.2308
98.4733
81.7803
129112921
50.0000
raldana-dualsentieonINDELI16_PLUS*het
98.2484
97.1302
99.3926
71.9668
2640782618168
50.0000
raldana-dualsentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
88.3436
82.7586
94.7368
83.5498
72157242
50.0000
raldana-dualsentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
93.9984
90.5660
97.7011
85.4515
96108521
50.0000
raldana-dualsentieonINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
95.0915
93.1250
97.1429
88.2452
1491113642
50.0000
ndellapenna-hhgaINDELD16_PLUSmap_sirenhomalt
83.8710
76.4706
92.8571
87.8788
2682621
50.0000
ndellapenna-hhgaINDELD16_PLUSsegdup*
93.1619
93.1034
93.2203
93.1949
5445542
50.0000
ndellapenna-hhgaINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
62.6589
45.8248
99.0431
30.1003
22526620721
50.0000
ndellapenna-hhgaINDELD1_5map_l250_m1_e0*
96.4497
95.3216
97.6048
94.7698
163816342
50.0000
ndellapenna-hhgaINDELD1_5map_l250_m1_e0het
95.4545
94.5946
96.3303
94.9373
105610542
50.0000
ndellapenna-hhgaINDELD1_5map_l250_m2_e0*
96.7033
95.6522
97.7778
95.0685
176817642
50.0000