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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 43 44 45 46 47 48 49 50 51 ... 1720 1721 » 2301-2350 / 86044 show all
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8366	99.9727	99.7008	51.3048	3665	1	3665	11	11	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	97.4161	95.5385	99.3691	21.9212	621	29	630	4	4	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.9899	99.4924	98.4925	60.5941	196	1	196	3	3	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.3478	98.9177	99.7817	28.1005	457	5	457	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	*	95.2381	93.3333	97.2222	64.3564	70	5	70	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	59.4595	13	0	13	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m0_e0	homalt	98.8327	98.4496	99.2188	83.8384	254	4	254	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m1_e0	homalt	99.1511	98.6486	99.6587	83.2763	584	8	584	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.1776	98.6907	99.6694	83.8924	603	8	603	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m2_e1	homalt	99.1896	98.7097	99.6743	83.9687	612	8	612	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m0_e0	homalt	98.3051	97.9730	98.6395	87.1166	145	3	145	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m1_e0	homalt	98.8473	98.2808	99.4203	85.4859	343	6	343	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m2_e0	homalt	98.8950	98.3516	99.4444	86.2385	358	6	358	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	98.9189	98.3871	99.4565	86.2224	366	6	366	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.4328	83	2	83	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m1_e0	homalt	98.6726	97.8070	99.5536	87.8128	223	5	223	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m2_e0	homalt	98.7500	97.9339	99.5798	88.4466	237	5	237	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m2_e1	homalt	98.5801	97.9839	99.1837	88.3666	243	5	243	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_siren	homalt	99.3571	99.1438	99.5712	81.3141	1158	10	1161	5	5	100.0000
jmaeng-gatk	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5203	359	0	359	2	2	100.0000
jmaeng-gatk	INDEL	D6_15	*	hetalt	96.4840	93.6261	99.5219	32.9957	7653	521	7702	37	37	100.0000
jmaeng-gatk	INDEL	D6_15	HG002complexvar	hetalt	93.2190	90.3258	96.3037	47.2880	915	98	964	37	37	100.0000
jmaeng-gatk	INDEL	D6_15	HG002compoundhet	hetalt	96.5549	93.6940	99.5959	24.0546	7637	514	7641	31	31	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.9768	87.2358	99.5265	30.0431	2064	302	2102	10	10	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.4991	95.5520	99.5272	33.1055	6509	303	6526	31	31	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.4782	93.6096	99.5281	29.2918	7544	515	7592	36	36	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	96.3680	95.2153	97.5490	76.7123	199	10	199	5	5	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	96.8504	96.8504	96.8504	78.9037	123	4	123	4	4	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.0833	43	0	43	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6528	99.6528	99.6528	69.7320	574	2	574	2	2	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	93.3511	89.0909	98.0392	62.2222	49	6	50	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	67.7888	487	0	487	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	90.3728	84.8485	96.6667	61.5385	28	5	29	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.6154	86.5925	99.5389	29.1978	1479	229	1511	7	7	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	92.1277	99.0847	86.0835	48.4103	433	4	433	70	70	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.4855	93.5742	99.5838	26.7211	6655	457	6699	28	28	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.6474	95.7705	99.5993	26.2869	5208	230	5220	21	21	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.4722	93.5461	99.5872	27.3535	6711	463	6755	28	28	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.4782	93.6096	99.5281	29.2918	7544	515	7592	36	36	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.3148	95.2850	99.4329	24.6012	4547	225	4559	26	26	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	*	83.6527	80.4403	87.1324	45.1060	950	231	948	140	140	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	71.2447	89.8649	59.0164	73.8944	133	15	108	75	75	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	86.0332	75.5734	99.8536	26.3215	659	213	682	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	82.5065	98.1366	71.1712	37.2881	158	3	158	64	64	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	95.8904	94.5946	97.2222	61.2903	35	2	35	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.4186	97.3773	99.4823	27.6981	1151	31	1153	6	6	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.6475	99.7647	99.5305	50.8083	848	2	848	4	4	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	96.3738	93.6948	99.2105	23.7713	743	50	754	6	6	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7743	99.7743	99.7743	34.9486	442	1	442	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	map_l100_m1_e0	homalt	96.8254	95.3125	98.3871	86.7804	61	3	61	1	1	100.0000

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